FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSChi473.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSChi473.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3588
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC102228.483835005574136No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG50914.186176142697882No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG43612.151616499442586No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCAGCCGCTGTCTCTTATAGCATCG39410.981047937569677No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG1534.264214046822742No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGAAGAACGCAGC1012.814938684503902No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTTGGTG701.950947603121516No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC621.7279821627647716No Hit
GGCTTGGTCATTTAGAGGAAGTAATCTCGCATCGATGAAGAACGCAGCCG541.5050167224080269No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC290.8082497212931996No Hit
GGCTTGGTCATTTAGAGGAAGTAAGCAGCATCGATGAAGAACGCAGCCGC190.5295429208472687No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCAATGAAGAACGCAGCCGC180.5016722408026756No Hit
GGCTTGGTCATTTAGAGGAAGTAACCCGCATCGATGAAGAACGCAGCCGC150.4180602006688963No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCCGCCGCTGTCTCTTATAGCATCG140.39018952062430323No Hit
GGCTTGGTCATTTAGAGGAAGTAAGCATCGATGAAGAACGCAGCCGCTGT140.39018952062430323No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCAGCCGTTGTCTCTTATAGCATCG130.36231884057971014No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCGCATCGATGAAGAACGCAGCCGC120.33444816053511706No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACCCAGCCGC100.2787068004459309No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATAAAGAACGCAGCCGC90.2508361204013378No Hit
GGCTTGGTCATTTAGAGGAAGTAACTTGCATCGATGAAGAACGCAGCCGC90.2508361204013378No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCAGCCGCTGTCTCTTATACACATC80.2229654403567447No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCAGCCGCTGTCTCTTCTAGCATCG80.2229654403567447No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTAGGTG80.2229654403567447No Hit
GGCTTGGTCATTTAGAGGAAGTAACACGCATCGATGAAGAACGCAGCCGC70.19509476031215162No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTTACAAGGTCTCCGTTGGTG70.19509476031215162No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGGTTCCGTAGGTG70.19509476031215162No Hit
GCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGCT60.16722408026755853No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGAACGCAGCCGC50.13935340022296544No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCTCATCGATGAAGAACGCAGCCGC50.13935340022296544No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGCG50.13935340022296544No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCAGCCGCTGTCCCTTATAGCATCG50.13935340022296544No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCAGCCGCTGCCTCTTATAGCATCG50.13935340022296544No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATAGATGAAGAACGCAGCCGC50.13935340022296544No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGCTGAAGAACGCAGCCGC40.11148272017837235No Hit
GCTTGGTCATTTAGAGGAAGTAACGCAGCCGCTGTCTCTTATAGCATCGA40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGACCGCAGCCGC40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGAATCGATGAAGAACGCAGCCGC40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTTGGTG40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAAATCGCATCGATGAAGAACGCAGCCGC40.11148272017837235No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATTGATGAAGAACGCAGCCGC40.11148272017837235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)