FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSChi472.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSChi472.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3539
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG85124.046340774230007No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC74721.10765753037581No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG63717.99943486860695No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG3018.505227465385703No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGAAGAACGCAGC1524.294998587171517No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC1143.221248940378638No Hit
GGCTTGGTCATTTAGAGGAAGTAACTGCATCGATGAAGAACGCAGCCGCT501.4128284826222097No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC491.3845719129697656No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCATCGATGAAGAACGCAGCCGC230.6499011020062164No Hit
GGCTTGGTCATTTAGAGGAAGTAAGTCTCGTGGCATCGATGAAGAACGCA150.42384854478666295No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCGCATCGATGAAGAACGCAGCCGC140.3955919751342187No Hit
GGCTTGGTCATTTAGAGGAAGTTCTCGCATCGATGAAGAACGCAGCCGCT120.3390788358293303No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG100.2825656965244419No Hit
GGCTTGGTCATTTAGAGGAAGTAAGCAGCATCGATGAAGAACGCAGCCGC100.2825656965244419No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCAATGAAGAACGCAGCCGC80.22605255721955356No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTTGGTG80.22605255721955356No Hit
GGCTTGGTCATTTAGAGGAAGTATCTGCATCGATGAAGAACGCAGCCGCT80.22605255721955356No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG80.22605255721955356No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGACCGCAGCCGC70.19779598756710934No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGCAGAACGC70.19779598756710934No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTTGGTG70.19779598756710934No Hit
GGCTTGGTCATTTAGAGGAAGTAACCCGCATCGATGAAGAACGCAGCCGC70.19779598756710934No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG60.16953941791466515No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGA60.16953941791466515No Hit
GGCTTGGTCATTTAGAGGAAGTAACACGCATCGATGAAGAACGCAGCCGC50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGTCGTAACAAGGTTTCCGTAGGTGA50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACCCAGCCGC50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGAACGCAGCCGC50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGCG50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGCTGGTG50.14128284826222096No Hit
GCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGCT50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTA50.14128284826222096No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGCTGAAGAACGCAGCCGC40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACTCAGCCGC40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTCTCCGTTGGTG40.11302627860977678No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATAAAGAACGCAGCCGC40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTAGGTG40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACAAGGTCTCCGTTGGTGA40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGCG40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTTGGTG40.11302627860977678No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA40.11302627860977678No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTCTCCGTAGGTG40.11302627860977678No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)