FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSChi471.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSChi471.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3898
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG103126.449461262185736No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG58615.033350436121088No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC58515.007696254489481No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC3418.74807593637763No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTCTCCGTAGGTG2827.2344792201128785No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG2346.003078501795793No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGAAGAACGCAGC1152.9502308876346843No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC481.2314007183170856No Hit
GGCTTGGTCATTTAGAGGAAGTACTCGCATCGATGAAGAACGCAGCCGCT130.33350436121087734No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGCAGAACGC130.33350436121087734No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTCTCCGTAGGCG120.3078501795792714No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGAGCATCGATGAAGAACGCA110.2821959979476654No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGA90.23088763468445359No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCAATGAAGAACGCAGCCGC80.2052334530528476No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACCCAGCCGC80.2052334530528476No Hit
GGCTTGGTCATTTAGAGGAAGTAAGCGTCGGCAGCATCGATGAAGAACGC70.17957927142124167No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTGGGTG50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTGACAAGGTCTCCGTAGGTG50.12827090815802974No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTCTCCGTAGGTGA50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTCTCCGTTGGTG50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGCATCGATGAAGAACGCAGCCGCT50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTA50.12827090815802974No Hit
GCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGCA50.12827090815802974No Hit
GCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGCT50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTAGGTG50.12827090815802974No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGTCGTAACAAGGTCTCCGTAGGTGA40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAAAGCAGCCGC40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGAACGCAGCCGC40.1026167265264238No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGCG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCTCATCGATGAAGAACGCAGCCGC40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAGGGTCTCCGTAGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAGGGTCTCCGTAGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTCGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTTGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAGGGTCTCCGTAGGTG40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCTC40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGTAGAACGCAGCCGC40.1026167265264238No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATCAAGAACGC40.1026167265264238No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)