FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSChi464.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSChi464.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20688
Sequences flagged as poor quality0
Sequence length301
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG1552175.02416860015468No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG18909.135730858468676No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG9584.630703789636504No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG800.3866976024748647No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGA780.37703016241299303No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGCG720.34802784222737815No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG710.3431941221964424No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG590.2851894818252127No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTAGGTG580.2803557617942769No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTCTCCGTAGGTG570.27552204176334105No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTCTCCGTAGGTG510.2465197215777262No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTAGGTG510.2465197215777262No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTCTCCGTAGGTG490.23685228151585463No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTCTCCGTAGGTG440.21268368136117557No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGCAGGTG440.21268368136117557No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTCTCCGTAGGTG380.18368136117556072No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTGACAAGGTCTCCGTAGGTG360.17401392111368907No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTA360.17401392111368907No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTGGGTG330.15951276102088166No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTCTCCGTAGGTG310.14984532095901004No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG270.1305104408352668No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTTCGTAGGTG270.1305104408352668No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAAGGTCTCCGTAGGTG250.1208430007733952No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG250.1208430007733952No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTACGTAGGTG220.10634184068058779No Hit
GGCTTGGCCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG210.10150812064965196No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)