FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSChi405.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSChi405.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12649
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG913072.17961894220886No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG192315.20278282868211No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC1240.9803146493793977No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG600.4743457980868053No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGGCAGCATCGATGAAGAACGCAGC590.46644003478535856No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTGA560.44272274488101826No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG450.355759348565104No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGCTTCCGTAGGTG380.3004190054549767No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG370.2925132421535299No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGCG370.2925132421535299No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC360.28460747885208315No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATACCAAGGTTTCCGTAGGTG310.24507866234484943No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAGCAAGGTTTCCGTAGGTG300.23717289904340266No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACGAGGTTTCCGTAGGTG260.20554984583761562No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCACAACAAGGTTTCCGTAGGTG260.20554984583761562No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG240.18973831923472212No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGCAGGTG210.16602102933038185No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTATAACAAGGTTTCCGTAGGTG200.15811526602893508No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTCCCGTAGGTG190.15020950272748834No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATGACAAGGTTTCCGTAGGTG190.15020950272748834No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCATAACAAGGTTTCCGTAGGTG190.15020950272748834No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG180.14230373942604158No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTTCGTAGGTG170.13439797612459484No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAGGGTTTCCGTAGGTG170.13439797612459484No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCATAACAAGGTTTCCGTAGGTG170.13439797612459484No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTA150.11858644952170133No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTGGGTG150.11858644952170133No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTACGTAGGTG140.11068068622025456No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA140.11068068622025456No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG130.10277492291880781No Hit
GGCTTGGTCATTTAGCGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG130.10277492291880781No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCTGTAGGTG130.10277492291880781No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG130.10277492291880781No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)