FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH892.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH892.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC24777.91798107255521No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGCAGAACGC92.8391167192429023No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG51.5772870662460567No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATCAAGAACGC30.9463722397476341No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATAAAGAACGC20.6309148264984227No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCCGCATCGATGAAGAACGC20.6309148264984227No Hit
GCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGCA20.6309148264984227No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC20.6309148264984227No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAATAAGGTTTCCGTAGGTG10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATAGTCGGCAGCATCGATGAAGACCGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAGGAACGC10.31545741324921134No Hit
AGGCCTGCAATGTACATCGGCTCGACCTCCGAGCGCGGGCTGCACCACCT10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAACGTCGGCAGCATCTATGAATAACTC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGTAAGTAATCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCAGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGGACGC10.31545741324921134No Hit
AGGCCGGGTATGTACATCGGGTCGACCGGCGTACGCGGCCTGCACCACCT10.31545741324921134No Hit
GTCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGAAGGGATGAAGAAGGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGGATGAAGAACG10.31545741324921134No Hit
GGCATGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGCAGAACGC10.31545741324921134No Hit
GGCTGGGTCATTTAGAGGAAGTAAGCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAACGTCGGAAGCATCGATCAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGGAACAAGGTTTCCGGAGGGC10.31545741324921134No Hit
GGCTTGGTCAATTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGAAGCATCGATGAAGAACGC10.31545741324921134No Hit
CGTCCCGCCATGTACATCGGCTCCACGGGCGAACGCGGCCTGCACCACCT10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAGAACGCA10.31545741324921134No Hit
CGGCCAGCTATGTATATTGGGGGCGTGGGCAGCGCCGGCCTGCACCACCT10.31545741324921134No Hit
AGGCCTGGGATGTACATCGGCGATACGGATGACGGTTCAGGCCTGCATCA10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATTGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATTGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGTTGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGAAGAATCTTTGCATAAGTG10.31545741324921134No Hit
GGCTTGGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACG10.31545741324921134No Hit
GGCTTGGTTATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAACCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCTATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGGAACCATCTATGCATAAGTC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCAATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATAGTCGGAAGCATCGATGAAGAACTC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAACGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGGGAGGGAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAAAGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAAACG10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGAATCGATGAATAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGCAGAAGGC10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAAGCGTCGGCAGCATCGATGAAGAACGC10.31545741324921134No Hit
GGCTTGGTCATTTAAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGCA10.31545741324921134No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATAGATGAAGAACGC10.31545741324921134No Hit
CGTCCAGCCATGTATATCGGCGGCACTGACGCCAATGCGCTCCATCACCT10.31545741324921134No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)