FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH370.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH370.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length301
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG323.076923076923077No Hit
AGACCAGGAATGTATATCGGCTCGACGGGCATCCGCGGGCTGCACCACCT17.6923076923076925No Hit
AGACCCGGTATGTACATTGGCTCGACCGGCGAGCGCGGTCTGGACCACCT17.6923076923076925No Hit
AGGCCTGGTATGTATATTGGGTCCACCGACAGCCGCGGCCTGGCACACCT17.6923076923076925No Hit
CGACCGGGGATGTACATAGGCGGCACCGACGACCGGGCGCTGCACCATCT17.6923076923076925No Hit
CGGCCAGGTATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA17.6923076923076925No Hit
CGACCTGCGATGTACATTGGCTCGACCGGCGAGCGAGGCCTGCACCACCT17.6923076923076925No Hit
CGACCAGGGATGTACATCGGCGACACGTCCGACGGCACCGGCCTGCACCA17.6923076923076925No Hit
AGACCAGCGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCATCA17.6923076923076925No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGGCATAGCAGGATTTCCGAGCGTG17.6923076923076925No Hit
GGCTTGGTCATTTAGAGGAAGTAACTGTCATCGCAAAGGTTCCGTACGGC17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)