FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH322.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH322.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48
Sequences flagged as poor quality0
Sequence length301
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC2654.166666666666664No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG612.5No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGAAGCCGC24.166666666666666No Hit
GGATTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTATCGCGCATCGATGAAGAACGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGACGCAGCCGCT12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCCATGAAGAACGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGA12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGGACGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAAAGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGACGAAGTAACTCGCATCGATGAAGAACGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG12.083333333333333No Hit
AGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC12.083333333333333No Hit
GGCTTGGTCATTTAGAGGAAGTAACACGCATCAAAGAAGTACGGAGCCGC12.083333333333333No Hit
GGCTTGGTAATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC12.083333333333333No Hit
AGACCTGGGATGTATATTGGCGACACCGACGATGGCTCGGGCCATCACCA12.083333333333333No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)