FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH320.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH320.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9603
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG667869.54076850984067No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG205621.409976049151307No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC620.645631573466625No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAATCTCTCGCATCGATGAAGAACGC550.572737686139748No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTGA390.4061230865354577No Hit
GGCTTGGTCATTTAGAGGAAGTAATCTCGCATCGATGAAGAACGCAGCCG310.3228157867333125No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG200.20826824950536288No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG160.16661459960429031No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATACCAAGGTTTCCGTAGGTG150.1562011871290222No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGCG140.14578777465375403No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA140.14578777465375403No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG130.1353743621784859No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCATAACAAGGTTTCCGTAGGTG130.1353743621784859No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGCAGGTG120.12496094970321774No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATGACAAGGTTTCCGTAGGTG120.12496094970321774No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG110.11454753722794961No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTGCGTAGGTG100.10413412475268144No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTACGTAGGTG100.10413412475268144No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAGCAAGGTTTCCGTAGGTG100.10413412475268144No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)