FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH303.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH303.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11073
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG554650.085794274361064No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG369833.39655016707306No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG3513.1698726632348952No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTAACCGTAGGTG1221.1017791023209609No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG690.6231373611487402No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTTTCCGTAGGTG280.25286733495890906No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA260.23480538246184413No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG230.20771245371624675No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG230.20771245371624675No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG230.20771245371624675No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG230.20771245371624675No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG220.19868147746771428No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGAAGAACGCAGC220.19868147746771428No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG220.19868147746771428No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG220.19868147746771428No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGA200.18061952497064934No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG190.17158854872211687No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG180.1625575724735844No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTCTCCGTAGGTG170.15352659622505194No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTG160.14449561997651947No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG150.135464643727987No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG150.135464643727987No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC140.12643366747945453No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTCTCCGTAGGTG130.11740269123092206No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTACGTAGGTG130.11740269123092206No Hit
GGTTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG120.1083717149823896No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG120.1083717149823896No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTA120.1083717149823896No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG120.1083717149823896No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTTCGTAGGTG120.1083717149823896No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTAGGTG120.1083717149823896No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG120.1083717149823896No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)