FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH291.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH291.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences233
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG9540.772532188841204No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC7632.61802575107296No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG187.725321888412018No Hit
GGCTTGGTCATTTAGAGGAAGTAATCTCGCATCGATGAAGAACGCAGCCG31.2875536480686696No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCAATGAAGAACGCAGCCGC20.8583690987124464No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG20.8583690987124464No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTCTCCGTAGGTG20.8583690987124464No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATAGATGAAGAACGCAGCCGC20.8583690987124464No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG20.8583690987124464No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGACGAAGAACGCAGCCGC20.8583690987124464No Hit
GGCTTGGTCATTTAGAGGAAGTAAATCGCATCGATGAAGAACGCAGCCGC10.4291845493562232No Hit
GCTTGGTCATTTAGAGGAAGTAACTCGCATCGCTGAAGAACGCAGCCGCT10.4291845493562232No Hit
GACTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGA10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACACGCATCGAAGGAGATCGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGACGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCGGC10.4291845493562232No Hit
AGACCGGGAATGTACATAGGTTCCACCGGCGAACGCGGTCTTCACCACCT10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.4291845493562232No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.4291845493562232No Hit
GGCTTGGTCATTTAGGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCG10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATAAAGAACGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCTGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGCAGGTG10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGAATCAATGAAGAACGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCATCCGC10.4291845493562232No Hit
GGATTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC10.4291845493562232No Hit
GTCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGAGAAGAACGCAGCCGCT10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAATCGCATCGATGAAGATCGCAGCCTC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGTAGAACGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAACGCGCATCGATGAAGAACGCAGCCGC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTGTCCGTAGGTG10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTGTTAAAAAGGTCTCGGTAGGTA10.4291845493562232No Hit
GAGTAACCGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTAC10.4291845493562232No Hit
AGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.4291845493562232No Hit
GGCTTGGTCATTTAGAAGGAAGTAACCTCGCATCGATGAAGAACGCAGCC10.4291845493562232No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTAGGTG10.4291845493562232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)