FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITSATH287.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITSATH287.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13145
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG735155.92240395587675No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG469135.68657284138455No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA440.33472803347280333No Hit
GGCTTGGTCATTTAGAGGAAGTAAATCGTCGGCAGCATCGATGAAGAACG420.3195131228604032No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTGA300.2282236591860023No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTA260.19779383796120195No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCATAACAAGGTTTCCGTAGGTG190.14454165081780143No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG170.1293267402054013No Hit
GGCTTGGTTATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG160.12171928489920121No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCATAACAAGGTTTCCGTAGGTG150.11411182959300115No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTACCAAGGTTTCCGTAGGTG140.10650437428680107No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)