FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve918.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve918.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2000
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT37018.5No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT31315.65No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1798.95No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT1407.000000000000001No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCATCGTGAATCTC1135.65No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT1025.1No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC562.8000000000000003No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC462.3No Hit
CGGAAGGATCATTACCACACCGACCACAGCAGTGGATGTCTAGGCTCTGT381.9No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT291.4500000000000002No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA231.15No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA190.95No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC180.8999999999999999No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG160.8No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC150.75No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT140.7000000000000001No Hit
CGGAAGGATCATTACCACCGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA120.6No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA120.6No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC120.6No Hit
CGGAAGGATCATTACCACATCTCCAGCAGTGGATGTCTAGGCTCTGTCTC90.44999999999999996No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACCAGCAGTGGAT80.4No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.3No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC50.25No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATTAAAA50.25No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT50.25No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT50.25No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCCCTGTCTCTT50.25No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTCTCTT50.25No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.2No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCATCGTGAAGCTC40.2No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCCGTCTCTT40.2No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAACCGTATCAAC40.2No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGCTCTTA40.2No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC40.2No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA30.15No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA30.15No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGCCTCTGTCT30.15No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTAT30.15No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT30.15No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC30.15No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC30.15No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC30.15No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCATCGTGAAACTC30.15No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT30.15No Hit
CGGAAGGATCATTACCACACAGCAGGGGATGTCTAGGCTCTGTCTCTTAT30.15No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGGTCTAGGCTCTGTCTCT30.15No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC30.15No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCAGCAGTGGATGTCTA30.15No Hit
CGGAAGGATCATTACCACACCGACCACAGCAGTGGATGTCTCGGCTCTGT30.15No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)