FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve902.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve902.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length301
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGCCATGTATATTGGCGACACCTCCGACGGCACGGGCCTGCACCA212.5No Hit
AGGCCTGGGATGTATATCGGCGACACCGACGACGGCTCCGGCCTTCACCA16.25No Hit
AGGCCAGGGATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCACCA16.25No Hit
CGTCCCGGGATGTACATCGGCGATGTGCACGACGGCACCGGCCTGCACCA16.25No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG16.25No Hit
CGTCCCGCCATGTATATCGGCTCGATCGGTGAGCGCGGCCTGCACCACCT16.25No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG16.25No Hit
CGTCCGGCAATGTACATTGGCTCGACGGACTCCCGGGGTCTCATGCACTG16.25No Hit
CGGCCTGGCATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA16.25No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG16.25No Hit
CGTCCGGCGATGTACATCGGCGACACCATGACGTACGGGCTGCACAAGCT16.25No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGTTG16.25No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC16.25No Hit
CGCCCTGGAATGTACATTGGCGATACCGACGACGGATCGGGCCTCCACCA16.25No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)