FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve846.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve846.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2882
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT52918.355308813324083No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC42614.781401804302568No Hit
CGGAAGGATCATTACCACATCTCCAGCCCACGGACCAGCAGTGGATGTCT1976.835530881332408No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA1966.800832755031229No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC1394.823039555863983No Hit
CGGAAGGATCATTACCACAACAGCAGTGGATGTCTAGGCTCTGTCTCTTA1364.718945176960444No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC1214.198473282442748No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT1033.573907009021513No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT943.2616238723108952No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC662.2900763358778624No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT582.012491325468425No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCTCCGAGCCCACGAGA431.4920194309507286No Hit
CGGAAGGATCATTACCACATCTGACGCTGCAGCAGTGGATGTCTAGGCTC301.040943789035392No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT250.8674531575294934No Hit
CGGAAGGATCATTACCACATCTCCAGCCCGCGGACCAGCAGTGGATGTCT210.7286606523247745No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC190.659264399722415No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC140.4857737682165163No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA100.3469812630117973No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAACGCTGAATCTC100.3469812630117973No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT100.3469812630117973No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT90.31228313671061764No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA80.2775850104094379No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC80.2775850104094379No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT80.2775850104094379No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC70.24288688410825815No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA70.24288688410825815No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCTAGCGCACGAGACCA50.17349063150589866No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT50.17349063150589866No Hit
CGGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.13879250520471895No Hit
CGGAAGGATCATTACCACATCTCCAGCCCACGGACCAGCAGCGGATGTCT40.13879250520471895No Hit
CGGAAGGATCATTACCACGAGACAACAGTGGATGTCTAGGCTCTGTCTCT40.13879250520471895No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGACTAGGCTCTGTCTCTTA40.13879250520471895No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGGGGATGTCTAGGCTCTGTC40.13879250520471895No Hit
CGGAAGGAGCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA40.13879250520471895No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCTCTGTCTC40.13879250520471895No Hit
CGGAAGGATCATTACCACTCGTCGACAGCAGTGGATGTCTAGGCTCTGTC40.13879250520471895No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGCCAGCAGTGGATGTCTAGGCTCTGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACAACAGCAGTGGATGTCTAGGCTCCGTCTCTTA30.1040943789035392No Hit
CGGAAGGATCATTACCACCTCCGAGCCCACGAGACAGCAGTGGATGTCTA30.1040943789035392No Hit
CGGAAGGATCATTACCACATCTGACGCTGCCGACGACAGCAGTGGATGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGAAGCAGTGGATGTCTAGGCTCTGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTCTCTCTTA30.1040943789035392No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGCCTCTGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGCTCTGTCTCTT30.1040943789035392No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCGCGAGACAGCAGTGGATGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCCCTGTCTCTTA30.1040943789035392No Hit
CGGAAGGATCATTACCACATCTCCAACCCACGGACCAGCAGTGGATGTCT30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGACTCTGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGCGGATGTCTAGGCTCTGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGAGGATGTCTAGGCTCTGTC30.1040943789035392No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT30.1040943789035392No Hit
CGGAAGGATCATTACCACGTCCAGCAGTGGATGTCTAGGCTCTGTCTCTT30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGCGACA30.1040943789035392No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTATGCTCTGTC30.1040943789035392No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)