FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve839.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve839.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2961
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA67422.76258020938872No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC39213.238770685579196No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC39113.204998311381292No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT2458.274231678486997No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC2438.206686930091186No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT2247.5650118203309695No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT1545.200945626477541No Hit
CGGAAGGATCATTACCACGAACAGCAGTGGATGTCTAGGCTCTGTCTCTT361.21580547112462No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT210.7092198581560284No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC130.4390408645727794No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA110.37149611617696726No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC90.303951367781155No Hit
CGGAAGGATCATTACCACCCAGCAGGGGATGTCTAGGCTCTGTCTCTTAT90.303951367781155No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA60.2026342451874367No Hit
CGGAAGGATCATTACCACAAAACCGCTTGATGTACTTCGGTATGTTGAGC60.2026342451874367No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC60.2026342451874367No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG60.2026342451874367No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTATAGGCTCTGTCTCTTAT60.2026342451874367No Hit
CGGAAGGATCATTACCACACAGCAGGGGATGTCTAGGCTCTGTCTCTTAT50.16886187098953057No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTGTCTCTTAA50.16886187098953057No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA50.16886187098953057No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAA50.16886187098953057No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA50.16886187098953057No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC40.13508949679162446No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA40.13508949679162446No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA40.13508949679162446No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTCTCTCTTAT40.13508949679162446No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT40.13508949679162446No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC40.13508949679162446No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC30.10131712259371835No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC30.10131712259371835No Hit
CGGAAGGATCATTCCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT30.10131712259371835No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAA30.10131712259371835No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGCCTCTGTC30.10131712259371835No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA30.10131712259371835No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10131712259371835No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC30.10131712259371835No Hit
CGGAAGGATCATTACCACTCGCCGGCAGCAGTGGATGTCTAGGCTCTGTC30.10131712259371835No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCTCTGTCTC30.10131712259371835No Hit
CGGAAGGATCATTACCACCCAGCAATGGATGTCTAGGCTCTGTCTCTTAT30.10131712259371835No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA30.10131712259371835No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG30.10131712259371835No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCCCTGTCTCTTAT30.10131712259371835No Hit
CGGAAGGATCATTATCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC30.10131712259371835No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)