FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve837.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve837.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3937
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT99725.323850647701295No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC2977.543815087630175No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA2666.7564135128270255No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA2446.197612395224791No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC1934.902209804419609No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1744.419608839217679No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1513.835407670815342No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT1213.0734061468122937No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA932.3622047244094486No Hit
CGGAAGGATCATTACCACATCTGACGCAGCAGTGGATGTCTAGGCTCTGT932.3622047244094486No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCTCTGTCTCT832.1082042164084327No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT771.9558039116078234No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT751.9050038100076199No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT551.397002794005588No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA541.3716027432054865No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT320.8128016256032511No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT200.5080010160020321No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG180.4572009144018288No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT150.381000762001524No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT120.3048006096012192No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA120.3048006096012192No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG120.3048006096012192No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT110.27940055880111764No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC100.25400050800101603No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC90.2286004572009144No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAACCTC80.20320040640081277No Hit
CGGAAGGATCATTACCACACCAAAAAAACTACCCACGTGAACCGTCAAAA70.17780035560071122No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA70.17780035560071122No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTCAAAA70.17780035560071122No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT70.17780035560071122No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAAACTC60.1524003048006096No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC60.1524003048006096No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATATC60.1524003048006096No Hit
CGGAAGGATCATTACCACACCAAAAGAACTATCCACGTGAACCGTCAAAA60.1524003048006096No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCTCTGTCTC60.1524003048006096No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA50.12700025400050802No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT50.12700025400050802No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT50.12700025400050802No Hit
CGGAAGGATCATTACCACAAGACCAGCAGTGGATGTCTAGGCTCTGTCTC50.12700025400050802No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGCAAA50.12700025400050802No Hit
CGGAAGGATCATTACCACACCTCCGAGCCCACGAGACTGCTCGTAATCTC50.12700025400050802No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT50.12700025400050802No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT50.12700025400050802No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTTGAAT50.12700025400050802No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA40.10160020320040639No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGCCAAAA40.10160020320040639No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCATGTGAACCGTCAGAAAT40.10160020320040639No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA40.10160020320040639No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT40.10160020320040639No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT40.10160020320040639No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT40.10160020320040639No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTCAAAA40.10160020320040639No Hit
CGGAAGGATCATTATCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.10160020320040639No Hit
CGGAAGGATCATTACCACATCTGACGCCGCAGTGGATGTCTAGGCTCTGT40.10160020320040639No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACTGTCTGGTA40.10160020320040639No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT40.10160020320040639No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT40.10160020320040639No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)