FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve836.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve836.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2732
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC46917.166910688140558No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC28510.431918008784773No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT2368.638360175695462No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT2228.125915080527086No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT1856.771595900439238No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT1575.746705710102489No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1525.563689604685212No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA1214.428989751098097No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT762.781844802342606No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT712.5988286969253296No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT552.013177159590044No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC170.6222547584187409No Hit
CGGAAGGATCATTACCACTTGTCGGCAGCAGTGGATGTCTAGGCTCTGTC150.5490483162518301No Hit
CGGAAGGATCATTACCACACAGCAGGGGATGTCTAGGCTCTGTCTCTTAT120.43923865300146414No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAACCTC120.43923865300146414No Hit
CGGAAGGATCATTACCACACCTCCGAGCCCACGAGACCAGCAGTGGATGT110.40263543191800877No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA90.32942898975109813No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC80.29282576866764276No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTAACAAC80.29282576866764276No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAAACTC60.21961932650073207No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC60.21961932650073207No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATATC60.21961932650073207No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT60.21961932650073207No Hit
CGGAAGGATCATTACCACCAGCAGGGGATGTCTAGGCTCTGTCTCTTATA50.18301610541727673No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT50.18301610541727673No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGCGGATGTCTAGGCTCTGTC50.18301610541727673No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC50.18301610541727673No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC40.14641288433382138No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC40.14641288433382138No Hit
CGGAAGGATCATTACCACGCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT40.14641288433382138No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA40.14641288433382138No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTATCTCTTAT40.14641288433382138No Hit
CGGAAGGATCATTACCACCCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC40.14641288433382138No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTCTCTCTTAT40.14641288433382138No Hit
CGGAAGGATCATTACCACACCTCCGAGCCCACGAGACTGCTCGTAATCTC40.14641288433382138No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTCGATGTCTAGGCTCTGTC40.14641288433382138No Hit
CGGAAGGATCATTACCACTCGTCGACAGCAGTGGATGTCTAGGCTCTGTC40.14641288433382138No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCCTAATCTC40.14641288433382138No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTATGCTCTGTC40.14641288433382138No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATATCTAGGCTCTGTCTCTT30.10980966325036604No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTATCTCG30.10980966325036604No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCGAGGCTCTGTCTCTTATA30.10980966325036604No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCCGTCTCTT30.10980966325036604No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGCCTCTGTC30.10980966325036604No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAAGCTC30.10980966325036604No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC30.10980966325036604No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC30.10980966325036604No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAAGACTGCTCGTAATCTC30.10980966325036604No Hit
CGGAAGGATCATTACCACAGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT30.10980966325036604No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCATC30.10980966325036604No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTATAGGCTCTGTCTCTTAT30.10980966325036604No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACCAGACTGCTCGTAATCTC30.10980966325036604No Hit
CGGAAGGATCATTACCACCAGCAGTGGCTGTCTAGGCTCTGTCTCTTATA30.10980966325036604No Hit
CGGAAGGATCATTACCACATCCCCGAGCCCACGAGACTGCTCGTAATCTC30.10980966325036604No Hit
CGGAAGGATCATTACCACTCATCGGCAGCAGTGGATGTCTAGGCTCTGTC30.10980966325036604No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGAAGTCTAGGCTCTGTCTCTT30.10980966325036604No Hit
CGGAAGGATCATTACCACAAAGCAGTGGATGTCTAGGCTCTGTCTCTTAT30.10980966325036604No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTTTAGGCTCTGTCTCTTAT30.10980966325036604No Hit
CGGAAGGATCATTACCGCACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10980966325036604No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)