FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve831.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve831.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6942
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC338948.81878421204264No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA73010.515701526937482No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA4746.82800345721694No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC2123.0538749639873233No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC2042.938634399308557No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT831.1956208585422068No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA570.8210890233362144No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC520.7490636704119851No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATA420.6050129645635264No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC410.5906078939786805No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA390.5617977528089888No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA380.547392682224143No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA340.48977239988475946No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC320.4609622587150677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC300.432152117545376No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC250.3601267646211466No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAA230.3313166234514549No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC230.3313166234514549No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA220.31691155286660905No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC200.2881014116969173No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC200.2881014116969173No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC180.25929127052722556No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT170.24488619994237973No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC170.24488619994237973No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC170.24488619994237973No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC170.24488619994237973No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC170.24488619994237973No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC160.23048112935753384No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC160.23048112935753384No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC140.20167098818784213No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC140.20167098818784213No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGCAGTGGATGTCTAGGCTC140.20167098818784213No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA130.18726591760299627No Hit
CGGAAGGATCATTACCACACCAAAAAAACATCCACGTGAACCGTTCAATA130.18726591760299627No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC120.17286084701815038No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTAAACA120.17286084701815038No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC120.17286084701815038No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC120.17286084701815038No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC120.17286084701815038No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC120.17286084701815038No Hit
CGGAAGGATCATTACCACACCAAAAACAAACCCACGTGAACCGTTAACAA120.17286084701815038No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC110.15845577643330452No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAC100.14405070584845864No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAT100.14405070584845864No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA90.12964563526361278No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTAAACA90.12964563526361278No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTATCAAC90.12964563526361278No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC90.12964563526361278No Hit
CGGAAGGATCTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA90.12964563526361278No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA90.12964563526361278No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC80.11524056467876692No Hit
CGGAAGGATCATTACCACACCAGAAAACTTTCCACGTGAACCGTTGTAAA80.11524056467876692No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC80.11524056467876692No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCAACGTGAACCGTTGTAAA80.11524056467876692No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC70.10083549409392106No Hit
CGGAAGGATCATTACCACACTTAAAAACTTTCCACGTGAACCGTATCAAC70.10083549409392106No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTTTAAA70.10083549409392106No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)