FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve829.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve829.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7700
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT314940.896103896103895No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA5397.000000000000001No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA5366.961038961038961No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA4205.454545454545454No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA3494.532467532467532No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA2212.87012987012987No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA1121.4545454545454546No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA1111.4415584415584417No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA1071.3896103896103895No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT941.2207792207792207No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTGTAAT560.7272727272727273No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG490.6363636363636364No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTCAAA350.45454545454545453No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA350.45454545454545453No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC320.4155844155844156No Hit
CGGAAGGATCATTACCACACCAAAAAAAGCTTTCCACGTGAACCGTTGTA310.40259740259740256No Hit
CGGAAGGATCATTACCACATCTCCCCAGCAGTGGATGTCTAGGCTCTGTC290.37662337662337664No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT280.36363636363636365No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT280.36363636363636365No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT260.33766233766233766No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAACAA230.29870129870129875No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG230.29870129870129875No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT200.2597402597402597No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT200.2597402597402597No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT200.2597402597402597No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAACCAA190.24675324675324678No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT190.24675324675324678No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT180.23376623376623376No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA180.23376623376623376No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT170.2207792207792208No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT170.2207792207792208No Hit
CGGAAGGATCATTACCACACCAAAAAACACTTTCCACGTGAACCGTTGTA170.2207792207792208No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT150.19480519480519481No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTGTAATT150.19480519480519481No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT140.18181818181818182No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA140.18181818181818182No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT130.16883116883116883No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA130.16883116883116883No Hit
CGGAAGGATCATTACCACGCCAAAAAATATCCACGTGAACCGTTAAGCAA120.15584415584415584No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAATCAA120.15584415584415584No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTAAAAA120.15584415584415584No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT120.15584415584415584No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT120.15584415584415584No Hit
CGGAAGGATCATTACCACACCAAAAAAAAACTTTCCACGTGAACCGTTGT110.14285714285714285No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT110.14285714285714285No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCCTCAGAAAT110.14285714285714285No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTAAACCGTCAGAAAT110.14285714285714285No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT110.14285714285714285No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT110.14285714285714285No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT100.12987012987012986No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAATCTGTACTG100.12987012987012986No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAACAA100.12987012987012986No Hit
CGGAAGGATCATTACCACACCAAAACCAATCCACGTGAACCGTCAGAAAT100.12987012987012986No Hit
CGGAAGGATCATTACCCCACCAAAAACAATCCACGTGAACCGTCAGAAAT100.12987012987012986No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT90.11688311688311688No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT90.11688311688311688No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA80.1038961038961039No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT80.1038961038961039No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAGCAA80.1038961038961039No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT80.1038961038961039No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT80.1038961038961039No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAAAAAA80.1038961038961039No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT80.1038961038961039No Hit
GGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA80.1038961038961039No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)