FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve828.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve828.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2636
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT47918.171471927162365No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA46017.450682852807283No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT27610.47040971168437No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACATCTC1565.918057663125948No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC1294.893778452200303No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT1214.590288315629742No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC943.566009104704097No Hit
CGGAAGGATCATTACCACGCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA612.314112291350531No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT521.9726858877086493No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC471.7830045523520486No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC411.5553869499241275No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA381.4415781487101669No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT381.4415781487101669No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT130.4931714719271623No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT110.417298937784522No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT110.417298937784522No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA100.37936267071320184No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT100.37936267071320184No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTAAACA60.2276176024279211No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAACA60.2276176024279211No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT60.2276176024279211No Hit
CGGAAGGATCATTACCACCTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC60.2276176024279211No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTCTACATCTC50.18968133535660092No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCCTCAGAAAT50.18968133535660092No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG50.18968133535660092No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT40.15174506828528073No Hit
CGGAAGGATCATTACCACGACGTCGTCAGCAGTGGATGTCTAGGCTCTGT40.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACTGTTAAACA40.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT40.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT40.15174506828528073No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACACCTC40.15174506828528073No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACAACTC40.15174506828528073No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG40.15174506828528073No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.15174506828528073No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTAAACA40.15174506828528073No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC40.15174506828528073No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA40.15174506828528073No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.15174506828528073No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT40.15174506828528073No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTAAACA30.11380880121396054No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG30.11380880121396054No Hit
CGGAGGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA30.11380880121396054No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT30.11380880121396054No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT30.11380880121396054No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA30.11380880121396054No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.11380880121396054No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTCGGCTCTGT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCATCAGAAAT30.11380880121396054No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCTCT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA30.11380880121396054No Hit
CGGAAAGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCCTTAAACA30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAGACA30.11380880121396054No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGGTCTAGGCTCTGTCTCT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT30.11380880121396054No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTAAACA30.11380880121396054No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)