FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve827.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve827.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6246
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT353556.59622158181236No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC2534.050592379122638No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT2023.234069804674992No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGCGTATACATCTC1472.353506243996158No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA1452.3214857508805635No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC1452.3214857508805635No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCT1362.1773935318603903No Hit
CGGAAGGATCATTACCACCCGACCAGCAGTGGATGTCTAGGCTCTGTCTC1272.033301312840218No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1262.0172910662824206No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC891.4249119436439321No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC570.9125840537944284No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT540.8645533141210375No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT430.6884406019852706No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG360.5763688760806917No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC340.5443483829650976No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT330.5283381364073007No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT310.49631764329170674No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT190.3041946845981428No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT180.2881844380403458No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT180.2881844380403458No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT180.2881844380403458No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTGGTAT170.2721741914825488No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT160.2561639449247518No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT150.24015369836695488No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT140.22414345180915787No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC140.22414345180915787No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT140.22414345180915787No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT140.22414345180915787No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT130.2081332052513609No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT130.2081332052513609No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT120.19212295869356388No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT110.17611271213576687No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT90.1440922190201729No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT90.1440922190201729No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT90.1440922190201729No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACATGAACCACTTTGTAT90.1440922190201729No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT80.1280819724623759No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT80.1280819724623759No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT80.1280819724623759No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT70.11207172590457894No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA70.11207172590457894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)