FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve826.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve826.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18552
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC805043.39154808106942No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT649134.98814144027598No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT2181.17507546356188No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA1820.9810263044415697No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACA1390.7492453643811988No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA1390.7492453643811988No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA1350.7276843467011642No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC1000.5390254420008624No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT700.3773178094006037No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC670.36114704614057785No Hit
CGGAAGGATCATTACCACATCTCCGGCCCACGAGACAGCAGTGGATGTCT630.33958602846054337No Hit
CGGAAGGATCATTACCACCCGGCCAGCAGTGGATGTCTAGGCTCTGTCTC620.33419577404053474No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC460.2479517033203967No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC460.2479517033203967No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT460.2479517033203967No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT400.21561017680034494No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA400.21561017680034494No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC390.21021992238033632No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC360.19404915912031048No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA350.18865890470030186No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC330.17787839586028462No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC320.172488141440276No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT300.16170763260025875No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT300.16170763260025875No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCAGAAA300.16170763260025875No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC290.15631737818025013No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA290.15631737818025013No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCCTCAGAAAT290.15631737818025013No Hit
CGGAAGGATCATTACCACACCTAAAACAATCCACGTGAACCGTCAGAAAT280.1509271237602415No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC280.1509271237602415No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG260.14014661492022423No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC260.14014661492022423No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC250.1347563605002156No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC250.1347563605002156No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC250.1347563605002156No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC230.12397585166019835No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC230.12397585166019835No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC230.12397585166019835No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC230.12397585166019835No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT230.12397585166019835No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT230.12397585166019835No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT220.11858559724018973No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT220.11858559724018973No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT210.11319534282018111No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC210.11319534282018111No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC190.10241483398016385No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT190.10241483398016385No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC190.10241483398016385No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)