FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve820.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve820.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12243
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT682555.74614065180102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAT206716.883116883116884No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT2091.7070979335130279No Hit
CGGAAGGATCATTACCACTCCGACCACAGCAGTGGATGTCTAGGCTCTGT1160.9474801927632117No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1140.9311443273707424No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT1010.8249612023196928No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA980.8004574042309892No Hit
CGGAAGGATCATTACCACTTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA930.7596177407498161No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT660.5390835579514826No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG620.5064118271665441No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT560.45740423098913663No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC550.44923629829290207No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTTAAATA540.44106836559666746No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC460.3757249040267908No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCCTCAGAAAT400.32671730784938335No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT390.31854937515314874No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT380.3103814424569141No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT360.294045577064445No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT360.294045577064445No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT340.2777097116719758No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT330.2695417789757413No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT300.24503798088703752No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTTTAAAT290.23687004819080293No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA290.23687004819080293No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT270.22053418279833373No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT260.21236625010209917No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT260.21236625010209917No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT250.20419831740586458No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT250.20419831740586458No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT230.1878624520133954No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT230.1878624520133954No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTTTAAATAT220.17969451931716085No Hit
CGGAAGGATCATTACCACACCAAAAACAATCTACGTGAACCGTCAGAAAT220.17969451931716085No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT210.17152658662092624No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT210.17152658662092624No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT200.16335865392469168No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT200.16335865392469168No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT190.15519072122845706No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCCCGTGAACCGTCAGAAAT180.1470227885322225No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT180.1470227885322225No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT170.1388548558359879No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAC160.13068692313975333No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT160.13068692313975333No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT150.12251899044351876No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTTTAAAT150.12251899044351876No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAT150.12251899044351876No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT140.11435105774728416No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC140.11435105774728416No Hit
CGGAAGGATCATTACCACACCTAAAACAATCCACGTGAACCGTCAGAAAT140.11435105774728416No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT140.11435105774728416No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC140.11435105774728416No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGGCAGAAAT130.10618312505104958No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAAAATGTACTGTC130.10618312505104958No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTTTAAAT130.10618312505104958No Hit
CGGAAGGATCATTACCCCACCAAAAACAATCCACGTGAACCGTCAGAAAT130.10618312505104958No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)