FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve816.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve816.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10779
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC574853.32591149457278No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT119011.03998515632248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAACA9719.008256795621115No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATA5344.9540773726690785No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT3323.0800630856294644No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATT1361.2617125892939975No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC840.7792930698580574No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA790.7329065776046015No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC540.5009741163373226No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT420.3896465349290287No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC380.352537341126264No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC380.352537341126264No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCCATA250.23193246126727898No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC230.21337786436589667No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTTGAACA190.176268670563132No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC180.16699137211244086No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC180.16699137211244086No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC180.16699137211244086No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC180.16699137211244086No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC170.1577140736617497No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC170.1577140736617497No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC170.1577140736617497No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC150.13915947676036738No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT140.12988217830967622No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC140.12988217830967622No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC140.12988217830967622No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC140.12988217830967622No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC120.11132758140829391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC120.11132758140829391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC120.11132758140829391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC120.11132758140829391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC120.11132758140829391No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTTGAACA120.11132758140829391No Hit
CGGAAGGATCATTACCACACCTAAAAACCATCCACGTGAACCGTTCAATA110.10205028295760274No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)