FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve808.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve808.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12659
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA640250.57271506438107No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA281022.19764594359744No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA6475.110988229717988No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA3843.033414961687337No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA1301.0269373568212339No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA410.3238802433051584No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAGCCGTTAAGCAA410.3238802433051584No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGCGAACCGTTAAGCAA390.30808120704637015No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTAAGCAA380.3001816889169761No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCGA380.3001816889169761No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA370.29228217078758195No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCCTTAAGCAA360.28438265265818785No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGGACCGTTAAGCAA350.27648313452879375No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTATTAAAC320.2527845801406114No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAG290.2290860257524291No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA290.2290860257524291No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAAGCAA290.2290860257524291No Hit
CGGAAGGATCATTACCACGCCAAAAACTACCCACGTGAACCGTTAAGCAA280.22118650762303502No Hit
CGGAAGGATCATTACCACGCCAAAAGCTATCCACGTGAACCGTTAAGCAA250.1974879532348527No Hit
CGGAAGGATTATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA250.1974879532348527No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATCTC250.1974879532348527No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCCTTAACCAA240.18958843510545856No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAGCCGTTAACCAA210.16588988071727626No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTAACCAA190.15009084445848805No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCGCGTGAACCGTTAAGCAA180.14219132632909393No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGCGAACCGTTAACCAA180.14219132632909393No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAGGCAA180.14219132632909393No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAC170.13429180819969982No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGAAA170.13429180819969982No Hit
CGGAAGGATCATTACCACGCCAAAGACTATCCACGTGAACCGTTAAGCAA170.13429180819969982No Hit
CGGAAGGATCATTACCACGCCAAAAACTGTCCACGTGAACCGTTAAGCAA160.1263922900703057No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTTAACCGTTAAGCAA160.1263922900703057No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCAACGTGAACCGTTAAGCAA150.1184927719409116No Hit
CGGAAGGATCATTACCACGCCGAAAACTATCCACGTGAACCGTTAAGCAA150.1184927719409116No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGGTAAGCAA150.1184927719409116No Hit
CGGAAGGATCATTACCACGCCAAAAACCATCCACGTGAACCGTTAAGCAA140.11059325381151751No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCCCGTGAACCGTTAAGCAA140.11059325381151751No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTAAACCGTTAAGCAA130.1026937356821234No Hit
CGGAAGGATTATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA130.1026937356821234No Hit
CGGAAGGATCATTACCACGCCAAGAACTATCCACGTGAACCGTTAAGCAA130.1026937356821234No Hit
CGGAAGGATCATTACTACGCCAAAAACTATCCACGTGAACCGTTAAGCAA130.1026937356821234No Hit
CGGAAGGATCATTACCACGCCTAAAACTATCCACGTGAACCGTTAACCAA130.1026937356821234No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)