FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve806.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve806.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11636
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC433837.28085252664145No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT326928.093846682708833No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC117310.080783774492954No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC2382.045376418013063No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1711.4695771742866963No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATCAAC1140.9797181161911309No Hit
CGGAAGGATCATTACCACTTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA870.7476796149879684No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT600.5156411137848058No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAATCTGTACTT510.43829494671708497No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCAACGTGAACTGTATCAAC470.4039188724647645No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAC440.37813681677552424No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAATCTGTACTT390.33516672396012376No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAACA380.32657270539704364No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTT320.2750085940185631No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATCAAC290.2492265383293228No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTAACACGTGAATCTGTACTT280.24063251976624267No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTTTC280.24063251976624267No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTT270.2320385012031626No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCGAC270.2320385012031626No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCACGTGAACTGTATCAAC260.2234444826400825No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATCAACAA240.2062564455139223No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAACTGTATCAAC230.19766242695084224No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACTGTATCAA220.18906840838776212No Hit
CGGAAGGATCATTACCACACCTAAAAACCTATCCACGTGAACCGTTAAGC220.18906840838776212No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC210.18047438982468203No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAC210.18047438982468203No Hit
CGGAAGGATTATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT200.1718803712616019No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATCAAC200.1718803712616019No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTAAACTGTATCAAC200.1718803712616019No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATCAAC190.16328635269852182No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAGTCTGTACTT180.15469233413544173No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAC160.13750429700928155No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTCCACGTGAACTGTATCAAC160.13750429700928155No Hit
CGGAAGGATCATTACCACACCAAAAAGACTTACCACGTGAATCTGTACTT160.13750429700928155No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACCT160.13750429700928155No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACTGTATCAA150.12891027844620145No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTT150.12891027844620145No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTCCACGTGAACTGTATCAAC140.12031625988312133No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGCATCAAC140.12031625988312133No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAGC130.11172224132004124No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAATCTGTACTTT130.11172224132004124No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATCAAC120.10312822275696115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTCTATCAAC120.10312822275696115No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATCAAC120.10312822275696115No Hit
CGGAAGGATCATTACCACCTAAAAAACTATCCACGTGAACCGTTAAGCAA120.10312822275696115No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATCAAC120.10312822275696115No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)