FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve805.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve805.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5264
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA162530.870060790273556No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC112221.314589665653497No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCATCCCACGTGAATTCGTAC2414.578267477203648No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATCTC1763.343465045592705No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT1552.9445288753799392No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTTGAAT1462.7735562310030395No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC1322.507598784194529No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT1192.2606382978723407No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTATACCG921.7477203647416413No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCTCTGTCTCT851.614741641337386No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC831.5767477203647418No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTG581.1018237082066868No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT390.7408814589665653No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC380.7218844984802432No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA210.39893617021276595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTACATA200.3799392097264438No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTACATACC200.3799392097264438No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACGTA160.303951367781155No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTACATA160.303951367781155No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC150.28495440729483285No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC140.26595744680851063No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC130.24696048632218845No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC130.24696048632218845No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC120.22796352583586624No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC110.20896656534954405No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTACATA110.20896656534954405No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC110.20896656534954405No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTACATA110.20896656534954405No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC100.1899696048632219No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTACATA100.1899696048632219No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA100.1899696048632219No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGAACTC90.17097264437689969No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTACATA90.17097264437689969No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA90.17097264437689969No Hit
CGGAAGGATCATTACCACACCAAGAAACTATCCACGTGAACCGTTACATA80.1519756838905775No Hit
CGGAAGGATTATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA80.1519756838905775No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCACATA70.13297872340425532No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTACATA70.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTACATA70.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTACATA70.13297872340425532No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC70.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC70.13297872340425532No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCATCCCACGTGAATTCGTAC70.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAGACTATCCACGTGAACCGTTACATA70.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAACAACTATCCACGTGAACCGTTACATA60.11398176291793312No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCCCTGTCTCT60.11398176291793312No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC60.11398176291793312No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC60.11398176291793312No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTATCCACGTGAACCGTTACAT60.11398176291793312No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC60.11398176291793312No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCGCGTGAACCGTTACATA60.11398176291793312No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC60.11398176291793312No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATATC60.11398176291793312No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC60.11398176291793312No Hit
CGGAAGGATCATTACCACACCAAAAAATTATCCACGTGAACCGTTACATA60.11398176291793312No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)