FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve804.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve804.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8188
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT526764.32584269662921No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA88810.84513922813874No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT1782.1739130434782608No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG921.1235955056179776No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT610.7449926722032242No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT460.5617977528089888No Hit
CGGAAGGATCATTACCACACCAAAAACAATTCACGTGAACCGTCAGAAAT420.5129457743038592No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC360.4396678065461651No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA350.42745481191988277No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCCTCAGAAAT330.403028822667318No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT330.403028822667318No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG290.35417684416218853No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT290.35417684416218853No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT260.31753786028334147No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT250.3053248656570591No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT250.3053248656570591No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT250.3053248656570591No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT240.29311187103077674No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT230.2808988764044944No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT220.268685881778212No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT210.2564728871519296No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT210.2564728871519296No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT200.24425989252564728No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC190.23204689789936492No Hit
CGGAAGGATCATTACCACGTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA180.21983390327308255No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT180.21983390327308255No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT180.21983390327308255No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT180.21983390327308255No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT160.19540791402051783No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATCAA150.18319491939423546No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC150.18319491939423546No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTAAACCGTCAGAAAT140.1709819247679531No Hit
CGGAAGGATCATTACCACACCAAAAACAATCTACGTGAACCGTCAGAAAT140.1709819247679531No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC140.1709819247679531No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT130.15876893014167073No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCCCGTGAACCGTCAGAAAT130.15876893014167073No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT130.15876893014167073No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT120.14655593551538837No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTAAGAAAT110.134342940889106No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT100.12212994626282364No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATCAA100.12212994626282364No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAC100.12212994626282364No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT100.12212994626282364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAACA100.12212994626282364No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT100.12212994626282364No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGGCAGAAAT90.10991695163654128No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT90.10991695163654128No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCATCAGAAAT90.10991695163654128No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT90.10991695163654128No Hit
CGGAAGGATCATTACCACACCTAAAACAATCCACGTGAACCGTCAGAAAT90.10991695163654128No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)