FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve803.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve803.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12223
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC957178.30319888734353No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAGCAGTGGATGTCTAGGC1401.1453816575308844No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGTAACGAGATCTC1401.1453816575308844No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA1291.055387384439172No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC1080.8835801358095394No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT820.6708663994109466No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC670.5481469361040661No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC560.45815266301235374No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC550.44997136545856176No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA550.44997136545856176No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC540.4417900679047697No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC480.3927022825820175No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC460.3763396874744334No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC450.3681583899206414No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC440.3599770923668494No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC400.32725190215168126No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC400.32725190215168126No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC360.29452671193651314No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC360.29452671193651314No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC340.27816411682892905No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT340.27816411682892905No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC330.26998281927513706No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC330.26998281927513706No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC310.253620224167553No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC300.24543892661376093No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC240.19635114129100875No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC210.17180724862963265No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC210.17180724862963265No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC200.16362595107584063No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC200.16362595107584063No Hit
TGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC200.16362595107584063No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC190.1554446535220486No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATCAAC180.14726335596825657No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC180.14726335596825657No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC170.13908205841446453No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC170.13908205841446453No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC170.13908205841446453No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA160.13090076086067248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC160.13090076086067248No Hit
CGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA160.13090076086067248No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA150.12271946330688047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAC150.12271946330688047No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA150.12271946330688047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC150.12271946330688047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCCAC150.12271946330688047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC130.1063568681992964No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC130.1063568681992964No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAT130.1063568681992964No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)