FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve800.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve800.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9516
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA401542.19209751996637No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT117212.316099201345104No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA6747.082807902480033No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA5125.3804119377889865No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA4364.581757040773434No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA3954.150903741067675No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT890.9352669188734763No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC860.903741067675494No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA500.5254308532997058No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA450.47288776796973514No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAT450.47288776796973514No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTAACCAA380.3993274485077764No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA320.33627574611181166No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTT290.30474989491382937No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCCTTAACCAA280.2942412778478352No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAATCTGTACTT260.273224043715847No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAGCCGTTAACCAA240.25220680958385877No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC240.25220680958385877No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGCGAACCGTTAACCAA240.25220680958385877No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC240.25220680958385877No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA230.24169819251786467No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAACC210.22068095838587645No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGGACCGTTAACCAA210.22068095838587645No Hit
CGGAAGGATTATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA190.1996637242538882No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAGCCAA190.1996637242538882No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTGACCAA170.17864649012189995No Hit
CGGAAGGATCATTACCACGCCAAAAGCTATCCACGTGAACCGTTAACCAA170.17864649012189995No Hit
CGGAAGGATCATTACCACGCCAAGAACTATCCACGTGAACCGTTAACCAA170.17864649012189995No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCGA160.16813787305590583No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTAAACCGTTAACCAA160.16813787305590583No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA150.15762925598991173No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAATCGTTAACCAA150.15762925598991173No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTACCACGTGAATCTGTACTT150.15762925598991173No Hit
CGGAAGGATCATTACCACGCCGAAAACTATCCACGTGAACCGTTAACCAA130.1366120218579235No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA130.1366120218579235No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT130.1366120218579235No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCTACGTGAACCGTCAAAA130.1366120218579235No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA120.12610340479192939No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTCAAAAAA120.12610340479192939No Hit
CGGAAGGATCATTACCACGCCTAAAACTATCCACGTGAACCGTTAACCAA120.12610340479192939No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAG120.12610340479192939No Hit
CGGAAGGATCATACCACGCCAAAAACTATCCACGTGAACCGTTAACCAAA120.12610340479192939No Hit
CGGAAGGATCATTACCACGCCAAAAACCATCCACGTGAACCGTTAACCAA110.11559478772593526No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCAACGTGAACCGTTAACCAA110.11559478772593526No Hit
CGGAAGGATCATTACCACGCCAAAAACTACCCACGTGAACCGTTAACCAA110.11559478772593526No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCCCGTGAACCGTTAACCAA100.10508617065994115No Hit
CGGAAGGATCATTACCACGCCAAAAACTGTCCACGTGAACCGTTAACCAA100.10508617065994115No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTT100.10508617065994115No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTACCACGTGAATCTGTACTT100.10508617065994115No Hit
CGGAAGGATCATTACCACGCCAAAGACTATCCACGTGAACCGTTAACCAA100.10508617065994115No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)