FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve799.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve799.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20360
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT1145756.2721021611002No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC547526.8909626719057No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACA2171.0658153241650294No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA2051.006876227897839No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT850.4174852652259332No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC720.35363457760314343No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGCTTTGTA570.2799607072691552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT500.2455795677799607No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT470.23084479371316305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT450.22102161100196463No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT440.21611001964636545No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT400.19646365422396855No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCGCTTTGTAT400.19646365422396855No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT390.19155206286836934No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT370.18172888015717092No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT350.1719056974459725No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT350.1719056974459725No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTCGTAT340.1669941060903733No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAACA320.15717092337917485No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCGCTTTGTAT300.14734774066797643No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAAACGCTTTGTAT290.14243614931237722No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCGCTTTGTAT290.14243614931237722No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTCTGTAT290.14243614931237722No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT280.137524557956778No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT280.137524557956778No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCGCTTTGTAT270.13261296660117877No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCGCTTTGTATT270.13261296660117877No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT270.13261296660117877No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC250.12278978388998035No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC240.11787819253438114No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGCTTTGTAT240.11787819253438114No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC240.11787819253438114No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT230.11296660117878193No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC230.11296660117878193No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC220.10805500982318272No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG220.10805500982318272No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTATGTAT210.10314341846758349No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)