FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve798.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve798.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3723
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT166144.61455815202793No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT41211.066344345957562No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGATCTACGATCTC2857.655116841257051No Hit
CGGAAGGATCATTACCACATCTCCGCAGCAGTGGATGTCTAGGCTCTGTC1864.99597099113618No Hit
CGGAAGGATCATTACCACCTCCAGCAGTGGATGTCTAGGCTCTGTCTCTT1804.8348106365834No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT1233.30378726833199No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA962.5785656728444803No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC421.1281224818694602No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT240.6446414182111201No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG170.45662100456621No Hit
CGGAAGGATCATTACCACATCTGGCTGCCGACCAGCAGTGGATGTCTAGG160.42976094547408006No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC140.37604082728982No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT130.34918076819769No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT100.26860059092130006No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT90.24174053182917005No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGATCTACGACCTC90.24174053182917005No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGATCTACGATATC90.24174053182917005No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT80.21488047273704003No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT80.21488047273704003No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT80.21488047273704003No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC80.21488047273704003No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT70.18802041364491No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGATCTACGAACTC70.18802041364491No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT70.18802041364491No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT70.18802041364491No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGATCTACGAGCTC60.16116035455278002No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT60.16116035455278002No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCACTGTCTCT60.16116035455278002No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT60.16116035455278002No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT50.13430029546065003No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT50.13430029546065003No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT50.13430029546065003No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT50.13430029546065003No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCACTTTGTAT50.13430029546065003No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT50.13430029546065003No Hit
CGGAAGGATCATTACCACACCATAAACTATCCACGTGAACCACTTTGTAT40.10744023636852001No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT40.10744023636852001No Hit
CGGAAGGATCATTACCACATCCCCGAGCCCACGAGACCAGCAGTGGATGT40.10744023636852001No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT40.10744023636852001No Hit
CGGAAGGATCATTACCACATCTCCGTGCCCACGAGACCAGCAGTGGATGT40.10744023636852001No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT40.10744023636852001No Hit
CGGAAGGATCTTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT40.10744023636852001No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT40.10744023636852001No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT40.10744023636852001No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)