FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve797.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve797.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5801
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA207535.76969488019307No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC84814.618169281158423No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA4517.774521634200999No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA4337.4642303051198065No Hit
CGGAAGGATCATTACCACACTCGCAGCAGTGGATGTCTAGGCTCTGTCTC2033.499396655749009No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT1903.2752973625237027No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA1242.1375624892259957No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC841.4480262023789003No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA741.2756421306671264No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA430.7412515083606275No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTACTCA280.4826754007929667No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC250.43096017927943453No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA240.41372177210825717No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA190.3275297362523703No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC180.3102913290811929No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA160.27581451473883817No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA160.27581451473883817No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA160.27581451473883817No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA150.25857610756766075No Hit
CGGAAGGATCATTACCACATCTGACGCTGCCCAGCAGTGGATGTCTAGGC150.25857610756766075No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTTGTAA140.24133770039648336No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA140.24133770039648336No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA130.22409929322530597No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA120.20686088605412858No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA120.20686088605412858No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA120.20686088605412858No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA110.1896224788829512No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC100.17238407171177383No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC90.15514566454059645No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA90.15514566454059645No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA90.15514566454059645No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTCAAAA90.15514566454059645No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAACCGTATTCA80.13790725736941908No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC80.13790725736941908No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTTCCACGTGAACCGTTGTAA80.13790725736941908No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA80.13790725736941908No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC80.13790725736941908No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATTCA80.13790725736941908No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTTCCACGTGAACCGTATTCA70.12066885019824168No Hit
CGGAAGGATCATTACCACACCAAGAAAACTATCCACGTGAACCGTCAAAA70.12066885019824168No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC70.12066885019824168No Hit
CGGAAGGATCACTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA60.10343044302706429No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTCTTCA60.10343044302706429No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA60.10343044302706429No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCT60.10343044302706429No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA60.10343044302706429No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)