FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve790.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve790.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7724
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC299038.71051268772657No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA209027.058518902123254No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT7029.088555152770585No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAAGCAA1331.721905748316934No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA981.2687726566545832No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTATCAA971.2558259968928016No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT570.7379596064215432No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC500.647332988089073No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTCAAAA400.5178663904712585No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC360.4660797514241326No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA360.4660797514241326No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA340.4401864319005696No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA310.4013464526152252No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATACACGTGAACCGTCAAAA310.4013464526152252No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC210.2718798549974107No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC200.25893319523562924No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC170.2200932159502848No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC140.18125323666494045No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGCGAACCGTCAAAA140.18125323666494045No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC140.18125323666494045No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT140.18125323666494045No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA130.16830657690315898No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.15535991714137753No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC120.15535991714137753No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC120.15535991714137753No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA120.15535991714137753No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA110.14241325737959606No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA110.14241325737959606No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC110.14241325737959606No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC110.14241325737959606No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC110.14241325737959606No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC100.12946659761781462No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA100.12946659761781462No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC100.12946659761781462No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC100.12946659761781462No Hit
CGGAAGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAAA90.11651993785603315No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC90.11651993785603315No Hit
CGGAAGGATTATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA90.11651993785603315No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGCCAAAA80.10357327809425168No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA80.10357327809425168No Hit
CGGAAGGATCATTACCACACCGAAAAAACTATCCACGTGAACCGTCAAAA80.10357327809425168No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC80.10357327809425168No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCGCGTGAACCGTCAAAA80.10357327809425168No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)