FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve787.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve787.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2512
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC59923.845541401273884No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA33313.256369426751593No Hit
CGGAAGGATCATTACCACTTCTTTACAGCAGTGGATGTCTAGGCTCTGTC1957.762738853503184No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA1957.762738853503184No Hit
CGGAAGGATCATTACCACATACGGCCGACAGCAGTGGATGTCTAGGCTCT1867.404458598726114No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCT1405.573248407643312No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT1285.095541401273886No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA522.0700636942675157No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA271.0748407643312101No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC140.5573248407643312No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA90.3582802547770701No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC90.3582802547770701No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCCCTGTCTCT70.2786624203821656No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCCGTCTCTTA60.23885350318471338No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC60.23885350318471338No Hit
CGGAAGGATCATTACCACGAGAGCAGTGGATGTCTAGGCTCTGTCTCTTA60.23885350318471338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.23885350318471338No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT50.19904458598726116No Hit
CGGAAGGATCATTACCACATAAGCAGTGGATGTCTAGGCTCTGTCTCTTA50.19904458598726116No Hit
CGGAAGGATCATTACCACTCGCCGGCAGCAGTGGATGTCTAGGCTCTGTC50.19904458598726116No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTCGATGTCTAGGCTCTGTC50.19904458598726116No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTCGGCTCTGTC50.19904458598726116No Hit
CGGAAGGATTATTACCACATACGGCCGACAGCAGTGGATGTCTAGGCTCT40.15923566878980894No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCCAGGCTCT40.15923566878980894No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT40.15923566878980894No Hit
CGGAAGGATCATTACCACATACGGCCGACAGCAGTGGATGTCTAGGCCCT40.15923566878980894No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAAGCTCTGTC40.15923566878980894No Hit
CGGAAGGATCATTACCACCCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC40.15923566878980894No Hit
CGGAAGGATTATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA40.15923566878980894No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCCCTGTCTCTTA40.15923566878980894No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA40.15923566878980894No Hit
CGGAAGGATCATTACCCCTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC40.15923566878980894No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTATGCTCTGTC40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTCCGAGCCAGCAGTGGATGTCTAGGCTCT30.11942675159235669No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGACTAGGCTCTGTCTCTTA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGCCTAGGCTCTGTCTCTTA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCCGTCTCTTA30.11942675159235669No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGCCTCTGTC30.11942675159235669No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATGAGAGACA30.11942675159235669No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATCAGAGACA30.11942675159235669No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCACTGTC30.11942675159235669No Hit
CGGAAGGATCATTACCACATACGGCCGACAGCAGTGGATGTCCAGGCTCT30.11942675159235669No Hit
CGGAAGGATTATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC30.11942675159235669No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGAGGATGTCTAGGCTCTGTC30.11942675159235669No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGAGTCTAGGCTCTGTCT30.11942675159235669No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)