FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve782.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve782.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4823
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC282258.511300020733984No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA53311.05121293800539No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC2224.602944225585735No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTTTCAAC581.2025710138917687No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT420.8708272859216255No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTCCAAC310.6427534729421522No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTTTCAAC310.6427534729421522No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTTTCAAC230.4768816089570807No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACTGTTTCAAC190.3939456769645449No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTTTCAAC180.3732116939664109No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTTTCAACCA170.352477710968277No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT170.352477710968277No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTCAAC160.33174372797014307No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAA160.33174372797014307No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCGAC160.33174372797014307No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAGC150.3110097449720091No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTTTCAAC150.3110097449720091No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTTTCAAC140.29027576197387517No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAC140.29027576197387517No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTTTCAAC130.2695417789757413No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTTTCAAC120.24880779597760727No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTTTCAAC100.20733982998133943No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTTTCAAC100.20733982998133943No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTTAAC100.20733982998133943No Hit
CGGAAGGATCATTACCACGCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA100.20733982998133943No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTTTCAAC100.20733982998133943No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTTTCAAC100.20733982998133943No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTCCACGTGAACCGTTTCAAC100.20733982998133943No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTTTCAAC100.20733982998133943No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC90.18660584698320545No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTTTCAAC90.18660584698320545No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTTTCAAC90.18660584698320545No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTTTCAAC90.18660584698320545No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC90.18660584698320545No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTTTCAAC80.16587186398507153No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTTTCAAC80.16587186398507153No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGATTCAAC80.16587186398507153No Hit
CGGAAGGATCTTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAACC80.16587186398507153No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTTCAAC70.14513788098693758No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTTTCAAC70.14513788098693758No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA60.12440389798880364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC60.12440389798880364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTTCAAC60.12440389798880364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCTCAAC60.12440389798880364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC60.12440389798880364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCAAGTGAACCGTTTCAAC60.12440389798880364No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCCAC60.12440389798880364No Hit
CGGAAGGATCATTACCACATCTCCAGCAGTGGATGTCTAGGCTCTGTCTC60.12440389798880364No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTTTCAAC60.12440389798880364No Hit
CGGAAGGATCATTACCACAACTAAAAACTTTCCACGTGAACCGTTTCAAC50.10366991499066971No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGAGAACCGTTTCAAC50.10366991499066971No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA50.10366991499066971No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACGGTTTCAAC50.10366991499066971No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAA50.10366991499066971No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCTAC50.10366991499066971No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)