FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve779.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve779.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2539
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC56322.174084285151636No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT31612.445844820795589No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA27110.673493501378495No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC1546.065380070894053No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT1375.3958251280031515No Hit
CGGAAGGATCATTACCACCGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA1204.726270185112249No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCTCTGTCTCT1134.450571090980701No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC953.741630563213864No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGCAGTGGATGTCTAGGCTC692.717605356439543No Hit
CGGAAGGATCATTACCACATCTGACAGCAGTGGATGTCTAGGCTCTGTCT491.929893658920835No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCCAGCAGTGGATGTCTAGGCT341.339109885781804No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA261.0240252067743205No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA180.7089405277668374No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC90.3544702638834187No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCCCTGTCTCT80.31508467900748327No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTCGATGTCTAGGCTCTGTC70.27569909413154786No Hit
CGGAAGGATCATTACCACTCAGCAGGGGATGTCTAGGCTCTGTCTCTTAT70.27569909413154786No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCCCTGTCTC70.27569909413154786No Hit
CGGAAGGATTATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC60.23631350925561243No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCCGTCTCTTA50.19692792437967704No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC50.19692792437967704No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGCCTAGGCTCTGTCTCTTA40.15754233950374164No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT40.15754233950374164No Hit
CGGAAGGATCATTACCACTAAGCAGTGGATGTCTAGGCTCTGTCTCTTAT40.15754233950374164No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTATAGGCTCTGTCTCTTAT40.15754233950374164No Hit
CGGAAGGATCATTACCACACCCAGCAGTGGATGTCTAGGCTCTGTCTCTT40.15754233950374164No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC40.15754233950374164No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCCCTGTCTCTTA40.15754233950374164No Hit
CGGAAGGATCATTACCACTCGTCGACAGCAGTGGATGTCTAGGCTCTGTC40.15754233950374164No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT30.11815675462780621No Hit
CGGAAGGATCATTACCACGTCGGCAGCCGTGGATGTCTAGGCTCTGTCTC30.11815675462780621No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAA30.11815675462780621No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT30.11815675462780621No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGCCTCTTAT30.11815675462780621No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTAGCAGCTATCTC30.11815675462780621No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGAAGTGGATGTCTAGGCTC30.11815675462780621No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCCGTCTCTT30.11815675462780621No Hit
CGGAAGGATCATTACCACATCTCCAAGCCCAGCAGTGGATGTCTAGGCTC30.11815675462780621No Hit
CGGAAGGATCATTACCACTCCTCGGCAGCAGTGGATGTCTAGGCTCTGTC30.11815675462780621No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGACTAGGCTCTGTCTCTTA30.11815675462780621No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGAGGATGTCTAGGCTCTGTC30.11815675462780621No Hit
CGGAAGGATCATTACCACATCGGCAGCAGTGGATGTCTAGGCTCTGTCTC30.11815675462780621No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)