FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve777.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve777.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA4129.28571428571429No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA1410.0No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT96.428571428571428No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC85.714285714285714No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT64.285714285714286No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT53.571428571428571No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGCAAC53.571428571428571No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC32.142857142857143No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC32.142857142857143No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAA32.142857142857143No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT21.4285714285714286No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAA21.4285714285714286No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAGCTGTCTGGTA21.4285714285714286No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA21.4285714285714286No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTGTACTG21.4285714285714286No Hit
CGGAAGGATCATTACCACATCAAAAAATCTATCCACGTGAACCGTCAAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACGAGTCCAACCTTGCCTGTTTAGGCTCTGCCAC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAACCGTATCAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTGCCACGTGAACCGTATCAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACAGTATGAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAACACTTTCCACGTGCCACGTATTCA10.7142857142857143No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACAGTATCAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA10.7142857142857143No Hit
CGGAACGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.7142857142857143No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGAGGTCTAGGCTTTGTCTC10.7142857142857143No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCCCTGTCTC10.7142857142857143No Hit
AGACCTGGCATGTATATTGGATCCACCTGCGAGCGCGGCTTGCAGCACCT10.7142857142857143No Hit
CGGAAGGATCATTACTACACCTAAAAACTTTCCACGTGAACTGTCTGGTA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT10.7142857142857143No Hit
CGGACGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCACCGTGAACCGTATCAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCAAAAAATCTTAACGTGAACCACTTTATAT10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGACCCGTATAATA10.7142857142857143No Hit
AGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCCACGTGAACCGTATCAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACAAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.7142857142857143No Hit
CGGAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTCAAAAACTTCCACGTGAACTGTATTAAA10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAACAGTTCACGCGTACCCTTAGAAAT10.7142857142857143No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAAAC10.7142857142857143No Hit
CGGAAGGATCATTACCACACCTAAAAATACCTTCGACGAGAACTGTATCT10.7142857142857143No Hit
CGGCCAGCAATGTATATAGGCGACACCGACGACGGCTCGGGCCTGCACCA10.7142857142857143No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGAAGTCTAGGCTCTGTCTA10.7142857142857143No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)