FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve774.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve774.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17768
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT1233269.40567312021612No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC205211.54885186852769No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC4442.4988743809095No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC1750.984916704187303No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACC590.33205763169743363No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT580.3264295362449347No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCGCTTTGTAT570.32080144079243583No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT530.29828905898244035No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT450.2532642953624493No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT440.24763619990995048No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACA430.2420081044574516No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT400.22512381809995496No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTCTGTAT380.21386762719495722No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACCGTGAACCGTATCAAC370.20823953174245835No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCGCTTTGTAT370.20823953174245835No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT370.20823953174245835No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG370.20823953174245835No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT360.20261143628995948No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT350.1969833408374606No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTCGTAT320.18009905447996397No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT310.17447095902746512No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT300.16884286357496625No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT290.16321476812246735No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT290.16321476812246735No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCGCTTTGTAT290.16321476812246735No Hit
CGGAAGGATCATTACCACACCAAAAACTTCCCCCGTGAACCGTATCAACC280.15758667266996848No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT260.14633048176497074No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA260.14633048176497074No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGCTTTGTAT250.14070238631247187No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAAACGCTTTGTAT240.13507429085997297No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT240.13507429085997297No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGCTTTGTAT230.1294461954074741No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTGT230.1294461954074741No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTATGTAT220.12381809995497524No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGCTTTGTA190.10693381359747861No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCGCTTTGTATT190.10693381359747861No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGCTTTGTAT180.10130571814497974No Hit
CGGAAGGATCATTACCACACCAAAACCTATCCACGTGAACCGCTTTGTAT180.10130571814497974No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCGCTTTGTAT180.10130571814497974No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC180.10130571814497974No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)