FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve772.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve772.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4808
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT379278.86855241264558No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA1302.703826955074875No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT581.2063227953410982No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT491.019134775374376No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT430.894342762063228No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT290.6031613976705491No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA220.4575707154742097No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT220.4575707154742097No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC200.4159733777038269No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT190.3951747088186356No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCGCTTTGTAT170.3535773710482529No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC140.2911813643926789No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT130.27038269550748756No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTATGTAT130.27038269550748756No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT130.27038269550748756No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT120.24958402662229617No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCGCTTTGTAT120.24958402662229617No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG120.24958402662229617No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT110.22878535773710484No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCGCTTTGTAT110.22878535773710484No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAAACGCTTTGTAT100.20798668885191346No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCCCGTGAACCGCTTTGTAT100.20798668885191346No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT90.18718801996672213No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT80.16638935108153077No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCGCTTTGTAT80.16638935108153077No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC70.14559068219633944No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT70.14559068219633944No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT70.14559068219633944No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT70.14559068219633944No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTGTGTAT60.12479201331114809No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGCACCGCTTTGTAT60.12479201331114809No Hit
CGGAAGGATCTTACCACACCAAAAACTATCCACGTGAACCGCTTTGTATT60.12479201331114809No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT60.12479201331114809No Hit
CGAAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT60.12479201331114809No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT60.12479201331114809No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT60.12479201331114809No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT60.12479201331114809No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCGCTTTGTAT50.10399334442595673No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTCTGTAT50.10399334442595673No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGCAT50.10399334442595673No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCGCTTTGTATT50.10399334442595673No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA50.10399334442595673No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCGCTTTGTAT50.10399334442595673No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)