FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OODve769.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OODve769.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10764
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT481244.70457079152732No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACCGTATCA9448.769973987365292No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA6466.001486436269045No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA5244.868078781122259No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT3933.6510590858416943No Hit
CGGAAGGATCATTACCACACCTAAAAAAAACTTTCCACGTGAACCGTATC2462.2853957636566333No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA2151.9973987365291712No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA1891.7558528428093645No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT1571.4585655890003717No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA1521.4121144555927163No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT540.5016722408026756No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA470.4366406540319584No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT450.4180602006688963No Hit
CGGAAGGATCATTACCACAGTCGTCGGCAGCAGTGGATGTCTAGGCTCTG430.3994797473058343No Hit
CGGAAGGATCATTACCACCTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC390.36231884057971014No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCCTCAGAAAT300.2787068004459309No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTACATAC290.26941657376439987No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA280.2601263470828688No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT270.2508361204013378No Hit
CGGAAGGATCATTACCACACCAAAAAATATTCATGAGAAACTTTTCGTTA260.24154589371980675No Hit
CGGAAGGATCATTACCACACCTAAAAACACTTTCCACGTGAACCGTATCA250.23225566703827574No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC230.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT230.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT220.20438498699368265No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT210.19509476031215162No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC210.19509476031215162No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT200.18580453363062058No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA190.17651430694908954No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGACCCGTATCA180.16722408026755853No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT160.14864362690449648No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT160.14864362690449648No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA150.13935340022296544No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT150.13935340022296544No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT140.1300631735414344No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT140.1300631735414344No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT140.1300631735414344No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTAAACCGTCAGAAAT140.1300631735414344No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT140.1300631735414344No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAAACGTCAGAAAT130.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTACAT120.11148272017837235No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT120.11148272017837235No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT120.11148272017837235No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT120.11148272017837235No Hit
CGGAAGGATCATTACCACACCAAAACCAATCCACGTGAACCGTCAGAAAT120.11148272017837235No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGCAAT110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT110.10219249349684133No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCCCGTGAACCGTCAGAAAT110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA110.10219249349684133No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTACATA110.10219249349684133No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT110.10219249349684133No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)