FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi759.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi759.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2283
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA78734.472185720543145No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT57125.010950503723173No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1225.343845816907578No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCAAAC482.102496714848883No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCACTTTGTA301.314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCACTTTGTAT180.7884362680683311No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC160.700832238282961No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA150.657030223390276No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGAAAA140.613228208497591No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT130.5694261936049059No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT90.39421813403416556No Hit
CGGAAGGATCATTACCACACCAAAAAACTATACACGTGAACCGTTACATA90.39421813403416556No Hit
CGGAAGGATCATTACCACCCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA80.3504161191414805No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCCCTTTGTAT80.3504161191414805No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACAGTTACATA70.3066141042487955No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTACATA70.3066141042487955No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT70.3066141042487955No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT70.3066141042487955No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCACTTTGTAT60.2628120893561104No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTACATA60.2628120893561104No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTACATA60.2628120893561104No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT50.2190100744634253No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT50.2190100744634253No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCCTTACATA50.2190100744634253No Hit
CGGAAGGATCATTACCACACCAAACACTATCCACGTGAACCACTTTGTAT50.2190100744634253No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT50.2190100744634253No Hit
CGGAAGGATCATACCACACCAAAAAACTATCCACGTGAACCGTTACATAC50.2190100744634253No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCATTACATA50.2190100744634253No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAATA50.2190100744634253No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG50.2190100744634253No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTACATACC50.2190100744634253No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACGTA40.17520805957074026No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTACATA40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAAACTGTCCACGTGAACCGTTACATA40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAGAAAACTATCCACGTGAACCGTTACATA40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAATTATCCACGTGAACCACTTTGTAT40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGCATA40.17520805957074026No Hit
CGGAAGGATTATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT40.17520805957074026No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCAAGTGAACCACTTTGTAT40.17520805957074026No Hit
CGGAAGGACCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCTACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCAAACCAAAAAACTATCCACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACTCGGCAGCAGTGGATGTCTAGGCTCTGTCTCT30.1314060446780552No Hit
CGGAAGGATCATTACCACAACAAAAAACTATCCACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCACAAACTATCCACGTGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT30.1314060446780552No Hit
CGGAAGGATAATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCAAGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGTACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATG30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATC30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATTCACGTGAACCGTTACATA30.1314060446780552No Hit
CGAAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAAACTATTCACGTTAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTACATA30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT30.1314060446780552No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT30.1314060446780552No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)