FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi758.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi758.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2669
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT119344.69838890970401No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1605.994754589733983No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATCTC1475.507680779318096No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC843.147246159610341No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT481.798426376920195No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC421.5736230798051705No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC371.3862869988759834No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT351.3113525665043086No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT321.1989509179467965No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC271.0116148370176097No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT271.0116148370176097No Hit
CGGAAGGATCATTACCACGGTGTATAAGAGACAGCAGTGGATGTCTAGGC260.9741476208317721No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT240.8992131884600975No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT240.8992131884600975No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT240.8992131884600975No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC240.8992131884600975No Hit
CGGAAGGATCATTACCACGAGACACGACACCAGCAGTGGATGTCTAGGCT220.8242787560884226No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA150.5620082427875608No Hit
CGGAAGGATCATTACCACGAGACAGCGGAAGGATCATTACCACGAGACAG140.5245410266017235No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA120.44960659423004873No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT120.44960659423004873No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.4121393780442113No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT110.4121393780442113No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT100.37467216185837393No Hit
CGGAAGGATCATTACCACGAGACAACAGTGGATGTCTAGGCTCTGTCTCT80.29973772948669913No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCTCT80.29973772948669913No Hit
CGGAAGGATCATTACCACGAGACCACGAGACAGCAGTGGATGTCTAGGCT70.26227051330086176No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTTT70.26227051330086176No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT70.26227051330086176No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT60.22480329711502436No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCACTGTCTCT60.22480329711502436No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT60.22480329711502436No Hit
CGGAAGGATCATTACCAAGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT60.22480329711502436No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTATGCTCTGTC60.22480329711502436No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT50.18733608092918697No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATATC50.18733608092918697No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT50.18733608092918697No Hit
CGGAAGGATCATTACCACTCCGAGCCCACGAGACCAGCAGTGGATGTCTA50.18733608092918697No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCTT50.18733608092918697No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGTTCTGTCTCT50.18733608092918697No Hit
CGGAAGGATCATTACTACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT50.18733608092918697No Hit
CGGAAGGATCATTACCACGAGACCGAGCCCACGAGACAGCAGTGGATGTC50.18733608092918697No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGGTCTAGGCTCTGTCTCT50.18733608092918697No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTCTCTT50.18733608092918697No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT40.14986886474334957No Hit
CGGAAGGATCATTACCACACGAGACAGCAGTGGATGTCTAGGCTCTGTCT40.14986886474334957No Hit
CGGAAGGATCATTATCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.14986886474334957No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC40.14986886474334957No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAAGACCGTAGCGAATCTC40.14986886474334957No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC30.11240164855751218No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGACTCTGTCTCT30.11240164855751218No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT30.11240164855751218No Hit
CGGAAGGATCATTACCACATCTGACGCTGCAGCAGTGGATGTCTAGGCTC30.11240164855751218No Hit
CGGAAGGATCATACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT30.11240164855751218No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCT30.11240164855751218No Hit
CGGAAGGATCATTACCCCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT30.11240164855751218No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGCTCTGTCTCTT30.11240164855751218No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGCCTAGGCTCTGTCTCT30.11240164855751218No Hit
CGGAAGGATCATTACCACACCTCCGAGCCCACGAGACCGTAGCGAATCTC30.11240164855751218No Hit
CGGAAGGATCATTACCACGAGACAGCAATGGATGTCTAGGCTCTGTCTCT30.11240164855751218No Hit
CGGAAGGATCATTACCACGTCTCGTGGCAGCAGTGGATGTCTAGGCTCTG30.11240164855751218No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCACT30.11240164855751218No Hit
CGGAAGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT30.11240164855751218No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)