FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi757.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi757.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3014
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT164854.67816854678168No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC1264.180491041804911No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1173.881884538818845No Hit
CGGAAGGATCATTACCACGTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA652.1566025215660254No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC451.4930325149303252No Hit
CGGAAGGATCATTACCACGCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT381.26078301260783No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT371.227604512276045No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC341.1280690112806901No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT341.1280690112806901No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT341.1280690112806901No Hit
CGGAAGGATCATTACCACATCTCCGAACCCACGAGACAGCAGTGGATGTC280.92899800928998No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATCTC270.8958195089581952No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT220.7299270072992701No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT190.630391506303915No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC180.5972130059721301No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA150.4976775049767751No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT120.3981420039814201No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT120.3981420039814201No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA120.3981420039814201No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT120.3981420039814201No Hit
CGGAAGGATCATTACCACGAGACACGACACCAGCAGTGGATGTCTAGGCT110.36496350364963503No Hit
CGGAAGGATCATTACCACGAGACAGCGGAAGGATCATTACCACGAGACAG90.29860650298606506No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT90.29860650298606506No Hit
CGGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT80.26542800265428No Hit
CGGAAGGATCATTACCACGAACCAGCAGTGGATGTCTAGGCTCTGTCTCT80.26542800265428No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC80.26542800265428No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT70.232249502322495No Hit
CGGAAGGATCATTACCACGAGACAACAGTGGATGTCTAGGCTCTGTCTCT70.232249502322495No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA70.232249502322495No Hit
CGGAAGGATCATTACCACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTT70.232249502322495No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT60.19907100199071004No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT60.19907100199071004No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCACTGTCTCT60.19907100199071004No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.19907100199071004No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA50.16589250165892502No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACACAGCAGTGGATG50.16589250165892502No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTTCTT40.13271400132714No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTATCT40.13271400132714No Hit
CGGGAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.13271400132714No Hit
CGGAAGGATCATTACCACGAGACAGAAGTGGATGTCTAGGCTCTGTCTCT40.13271400132714No Hit
CGGAAGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT40.13271400132714No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)