FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi756.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi756.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences305
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT17256.393442622950815No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC196.229508196721312No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACCAGCAGTGGATGTCTAGG72.2950819672131146No Hit
CGGAAGGATCATTACCACGAACAGCAGTGGATGTCTAGGCTCTGTCTCTT72.2950819672131146No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT61.9672131147540985No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCT61.9672131147540985No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT51.639344262295082No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC41.3114754098360655No Hit
CGGAAGGATCATTACCACATCTGACAGCAGTGGATGTCTAGGCTCTGTCT41.3114754098360655No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.9836065573770493No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT30.9836065573770493No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.9836065573770493No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT20.6557377049180327No Hit
CGGAAGGATCATTACCACGAGGACAGCAGTGGATGTCTAGGCTCTGTCTC20.6557377049180327No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGGTCTAGGCTCTGTCTCT20.6557377049180327No Hit
AGACCCGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG10.32786885245901637No Hit
CGGAAGGATCACTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGCGGATGTCTAGGCGCGGCC10.32786885245901637No Hit
CGGAAGGATCATACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCTG10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGCCTAGGCCCTGTCTCC10.32786885245901637No Hit
CGGAAGGACCATTACCACGAGACAGCAGTGGATGACTAGGCTCTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTCGGCTCTGT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGGACAGCAGTGGATGTCTAGGATCTGTCTC10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAGATGTCTAGGCTCTGTC10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCTGCAGCAGTGGATGTCTAGGCTCTGTC10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTATCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTATAGGCTCTGTC10.32786885245901637No Hit
CGTCCTGGAATGTATATTGGCGATACCGACGACGGCTCCGGCCTCCACCA10.32786885245901637No Hit
CGGAAGGATTATTACCACATCTGACAGCAGTGGATGTCTAGGCTCTGTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCGTCAGATGTGTATAAGAGACA10.32786885245901637No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTACGCTCTGT10.32786885245901637No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.32786885245901637No Hit
GGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.32786885245901637No Hit
AGTCCGGGTATGTACATCGGCTCCACGGGTCCACGCGGTCTGCACCACCT10.32786885245901637No Hit
AGGCCAGGGATGTACATTGGCGACACCGATGACGGGTCCGGCCTGCACCA10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTAT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAACAGCAGTGGATGTCTAGGCCCTGTCTCTT10.32786885245901637No Hit
CGGAAGGAGAAGGAAAACGAGAGAGCAGTGGATGTCTAGGCTCTGTCTCT10.32786885245901637No Hit
AGCCCCGGAATGTATATCGGGCGGCCTACACGGCGTCTGTCTCTATACAC10.32786885245901637No Hit
CGGCCTGGGATGTATATTGGCGGTACGGGCAAGGACGGTTATCACCACCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCGCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACACGAGACAGCAGTGGATGTCTACTCTT10.32786885245901637No Hit
AGGCCAGGAATGTACATCGGCGACACGGGCATTAAGGGCCTGCACCATTT10.32786885245901637No Hit
CGGAAGGATCATTACAACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTGGCAGCAGTGGATGTCTAGGCTCTGTTT10.32786885245901637No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC10.32786885245901637No Hit
CGGAAGGTCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.32786885245901637No Hit
CGGCCCGGTATGTATATTGGCTCCACCGACTCCCGCGGCCTCATGCACTG10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCCGTGGATGTCTAGGCCCTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGGCTCTGTCTC10.32786885245901637No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.32786885245901637No Hit
CGGAAGGATCATTACCACACCTAAAAAAGTTTCCACGTGAACCGTATTCA10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCTCT10.32786885245901637No Hit
AGACCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGGGGATGTCTAAGCTCTGTC10.32786885245901637No Hit
AGGAAGGATCATTCCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.32786885245901637No Hit
CGGAAGGATCATTACCACATCTCCGACCCAGCAGTGGATGTCTAGGCTCT10.32786885245901637No Hit
AGACCCGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGCAGATGTGTAGAAGAGGCA10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTATGCTCTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACTCGTCGGAAGCAGTGGATGTCTAGGCTCTGTC10.32786885245901637No Hit
CTGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC10.32786885245901637No Hit
CGCCCCGGAATGTACATAGGTGATACCGACGACGGGTCGGGCCTGCACCA10.32786885245901637No Hit
CGGAAGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.32786885245901637No Hit
CGACCAGCTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA10.32786885245901637No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCCTCT10.32786885245901637No Hit
CGGAAGGATCATTACCCCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.32786885245901637No Hit
AGGCCTGGCATGTATATCGGCGACACGTCCGACGGCACCGGCCTGCACCA10.32786885245901637No Hit
CAGTGGAGGGAGAGGCGGGGGCTCTTATACACATCTCCGAGCCCACGAGA10.32786885245901637No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT10.32786885245901637No Hit
CTGAAGGATCATTACCACACCTCCGAGCCAGCAGTGGATGCCCAGGCTTT10.32786885245901637No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)