FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi755.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi755.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2433
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT105643.40320591861899No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1867.644882860665844No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA743.0415125359638306No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT652.6715988491574185No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTCTCTT642.630497328401151No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT471.9317714755445952No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGCAGTGGATGTCTAGGCTC441.8084669132757913No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT441.8084669132757913No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC441.8084669132757913No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC381.5618577887381833No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGGCTCTGTCTC361.4796547472256474No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC341.3974517057131115No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT291.1919441019317716No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCT281.1508425811755036No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATCTC220.9042334566378957No Hit
CGGAAGGATCATTACCACTCGTCGCAGCGTCAGATGTGTATAAGAGGCAG160.6576243321002877No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT160.6576243321002877No Hit
CGGAAGGATCATTACCACTCCGAGCCCACGAGACAGCAGTGGATGTCTAG150.6165228113440198No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT120.4932182490752158No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT100.4110152075626798No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT100.4110152075626798No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT100.4110152075626798No Hit
CGGAAGGATCATTACCACTCGTCGCAGCAGTGGATGTCTAGGCTCTGTCT90.36991368680641185No Hit
CGGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT80.32881216605014385No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCACTGTCTCT70.2877106452938759No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCTCT70.2877106452938759No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA70.2877106452938759No Hit
CGGAAGGATCATTACCACGAACAGCAGTGGATGTCTAGGCTCTGTCTCTT60.2466091245376079No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC60.2466091245376079No Hit
CGGAAGGATCATTACCACGAGACACGACACCAGCAGTGGATGTCTAGGCT50.2055076037813399No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA50.2055076037813399No Hit
CGGAAGGATCATTACCACGATACAGCAGTGGATGTCTAGGCTCTGTCTCT50.2055076037813399No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC50.2055076037813399No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT40.16440608302507193No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT40.16440608302507193No Hit
CGGAAGGATCATTACCACGAGACAGCGGAAGGATCATTACCACGAGACAG40.16440608302507193No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCCTGTCTC40.16440608302507193No Hit
CGGAAGGATCATTATCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.16440608302507193No Hit
CGGAAGGATCATTACCCCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.16440608302507193No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTTT40.16440608302507193No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTCGATGTCTAGGCTCTGTC40.16440608302507193No Hit
CGGAAGGATCATTACCACGAGACTCAGCAGTGGATGTCTAGGCTCTGTCT40.16440608302507193No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT40.16440608302507193No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT30.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAACAGTGGATGTCTAGGCTCTGTCTCT30.12330456226880394No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT30.12330456226880394No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA30.12330456226880394No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC30.12330456226880394No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGGCCCTGTCTC30.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCTT30.12330456226880394No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCCCTGTCTCTTA30.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCATGGATGTCTAGGCTCTGTCTCTT30.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTATAGGCTCTGTCTCT30.12330456226880394No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATATCTAGGCTCTGTCTCTT30.12330456226880394No Hit
CGGAAGGATCATTACCACTAGACAGCAGTGGATGTCTAGGCTCTGTCTCT30.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCTCTT30.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGAATGTCTAGGCTCTGTCT30.12330456226880394No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)