FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi751.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi751.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17343
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA545531.453612408464508No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA345019.892752119010552No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA232513.405985123681024No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC8014.618578100674624No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC3592.0699994233984893No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA2021.1647350516058352No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA1961.1301389609640777No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA1610.9283284322204923No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC930.536239404947241No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATCAAA890.5131753445194027No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA840.4843452689846047No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA740.4266851179150089No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA730.4209191028080494No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC650.3747909819523727No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA560.3228968459897365No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAA480.27676872513405987No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC460.2652366949201407No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA450.2594706798131811No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATCAAAAC430.24793864959926196No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA430.24793864959926196No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCACGTGAACTGTATCAAA430.24793864959926196No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATAAAA400.2306406042783832No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA370.21334255895750445No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA370.21334255895750445No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCAACGTGAACTGTATCAAA350.2018105287435853No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA310.178746468315747No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA300.1729804532087874No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG300.1729804532087874No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC270.15568240788790866No Hit
CGGAAGGATCATTACCACCCTAAAAAACTTCCACGTGAACTGTATCAACA270.15568240788790866No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAA270.15568240788790866No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA260.1499163927809491No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAA260.1499163927809491No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATCAAA250.1441503776739895No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA250.1441503776739895No Hit
CGGAAGGATCATTACCACACCTAAACACTTTCCACGTGAACCGTATCAAA240.13838436256702993No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA230.13261834746007034No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTACACGTGAACCGTATTCA230.13261834746007034No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCGCGTGAACTGTATCAAA230.13261834746007034No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTTCACGTGAACCGTATCAAC230.13261834746007034No Hit
CGGAAGGATCATTACCACATCTAAAAAACTTTCCACGTGAACCGTATTCA230.13261834746007034No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA220.12685233235311077No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA220.12685233235311077No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA210.12108631724615118No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA200.1153203021391916No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA190.10955428703223202No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTCCACGTGAACTGTATCAAA190.10955428703223202No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA180.10378827192527244No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAA180.10378827192527244No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC180.10378827192527244No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)