FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi746.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi746.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC14928.38095238095238No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC12924.571428571428573No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT6512.380952380952381No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT499.333333333333334No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC101.9047619047619049No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT50.9523809523809524No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC50.9523809523809524No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC50.9523809523809524No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG40.7619047619047619No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.5714285714285714No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTAGATGTCTAGGCTCTGTCTC20.38095238095238093No Hit
CGGAAGGATTATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC20.38095238095238093No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTTAATA20.38095238095238093No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCCCTGTCTCT20.38095238095238093No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.38095238095238093No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCTCTGTCTC20.38095238095238093No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC20.38095238095238093No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTTAC20.38095238095238093No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCACTGTCTCT20.38095238095238093No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGAGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCGGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCAGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCCGCAGCAGTGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.19047619047619047No Hit
CGACCAGGTATGTATATTGGCGACACCTCCGACGGCACCGGCCTGCACCA10.19047619047619047No Hit
CGGAAGGATCATTACCACAACTAAAAACTTTCCACGGGAACCGGATCAAA10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCTCTGTATC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCCCT10.19047619047619047No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGCCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGATCTGTCTC10.19047619047619047No Hit
CGGAAGAATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGTGCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACAACTTAAAACTATCCACGTGAACCGTTTGTAC10.19047619047619047No Hit
CGGAAGGATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTATC10.19047619047619047No Hit
CGGAAGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGAACAGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACAAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTTTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCGTCT10.19047619047619047No Hit
CGGAAGGATCGTTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC10.19047619047619047No Hit
CGCCCCGGGATGTACATCGGCGATACCGACGACGGGTCGGGCCTGCACCA10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCCC10.19047619047619047No Hit
CGTCCCGCTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAAACTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCCCTGTCTTT10.19047619047619047No Hit
CGGAAGGATCATCACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTACGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATACCACTCGTCGGCAGCAGTGAATGTCTAGGCTCTGTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTATGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGCACGTCTAGGCGTTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGACGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
AGACCGGGGATGTATATAGGGTCCACGGGTCCGCGCGGTCTCCACCACCT10.19047619047619047No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTTGATGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTTCT10.19047619047619047No Hit
CGAAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGACAGCAGTGGATGTCTCGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGCCTCTGTC10.19047619047619047No Hit
AGTCCAGCAATGTATATCGGGTCCACCGGCGAACGCGGTCTGCACCATCT10.19047619047619047No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCTGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGCCAGCAGTGGATGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCAACGTGAACCGTTTGTAC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGCTGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCACTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGGTGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGACGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTAAATGTCTAGGCTCTGTC10.19047619047619047No Hit
GGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCCCT10.19047619047619047No Hit
CGGAAGGATCATTACTACTCGTCGGCAGCAGTGGATGTCTAGGCCCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCACTGTC10.19047619047619047No Hit
AGACCAGCAATGTATATTGGGGGCACCGACGAAAAGGCGCTGCATCATCT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAACAGTGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTCGGCTCTGTC10.19047619047619047No Hit
CGGCCGGGGATGTACATCGGCTCTACCGGCCCCCGGGGTCTGCACCACCT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGATGTCTAGGCTCTGTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGTCTCTGTC10.19047619047619047No Hit
CGGATGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
AGTCCTGGTATGTACATCGGCTCCACCGGCGAGCGCGGCCTGCACCACAT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGGTGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGGATGTCTAGGCTCTGT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGATGTCTAGGCTCTGTCTCTT10.19047619047619047No Hit
TGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACAGCAGTTGATGTCTAGGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGGGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTTAT10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAGCAGCAGTGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAGGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTTTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACTCGTCAACAGTTTATGTCTAGGCTCTTTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTTTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGCGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTTCTGTCT10.19047619047619047No Hit
TGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGCTCTGTCTCT10.19047619047619047No Hit
CGGAAGGATCATTACCAAGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19047619047619047No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)