FastQCFastQC Report
Fri 3 May 2024
000000000-L7NBT_l01_n01_repeat-ITS-OOChi745.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-L7NBT_l01_n01_repeat-ITS-OOChi745.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5396
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC181733.67309117865086No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA136825.352112676056336No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC2955.467012601927354No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA2234.132690882134915No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC1502.7798369162342476No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC1292.390659747961453No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC1021.8902891030392883No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA931.7234988880652335No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC430.7968865826538176No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA420.7783543365455894No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT400.7412898443291327No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA250.46330615270570796No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC220.407709414381023No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA210.3891771682727947No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC200.37064492216456635No Hit
CGGAAGGATCATTACCACACCTAAAAATTTTCCACGTGAACCGTATCAAA180.3335804299481097No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC170.3150481838398814No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAA150.2779836916234248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA150.2779836916234248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA150.2779836916234248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC130.24091919940696813No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC130.24091919940696813No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA120.2223869532987398No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC110.2038547071905115No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC110.2038547071905115No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCAACGTGAACCGTATCAAC100.18532246108228317No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC100.18532246108228317No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC100.18532246108228317No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA90.16679021497405486No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA90.16679021497405486No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA90.16679021497405486No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTATCTCG80.14825796886582654No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA80.14825796886582654No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC80.14825796886582654No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC80.14825796886582654No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC80.14825796886582654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAC70.12972572275759822No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC70.12972572275759822No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC70.12972572275759822No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA70.12972572275759822No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC70.12972572275759822No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAACCTC70.12972572275759822No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT70.12972572275759822No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCATGTGAACCGTATCAAC60.1111934766493699No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAA60.1111934766493699No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCCTATCAAA60.1111934766493699No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC60.1111934766493699No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA60.1111934766493699No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC60.1111934766493699No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA60.1111934766493699No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)